DRSC/TRiP Functional Genomics Resources

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Protein Alignment NCK1 and aru

DIOPT Version :9

Sequence 1:NP_001278928.1 Gene:NCK1 / 4690 HGNCID:7664 Length:377 Species:Homo sapiens
Sequence 2:NP_722663.1 Gene:aru / 33268 FlyBaseID:FBgn0029095 Length:805 Species:Drosophila melanogaster


Alignment Length:132 Identity:33/132 - (25%)
Similarity:53/132 - (40%) Gaps:43/132 - (32%)


- Green bases have known domain annotations that are detailed below.


Human   185 NLNTGQVLH------------VVQALYPFSSSNDEELNFEKGDVMDVIEKPENDPEWWKCRKING 237
            |::..|:|.            :|...||.:::||:||:..:|:.::::   ::..:|||.|.:.|
  Fly   670 NVSDDQMLESWLEDLQATGAKIVLVTYPRTANNDKELSVMRGEYLEIL---DDTRKWWKARNMRG 731

Human   238 MVGLVPKNYVTV-------------MQNNPLT----------SGLEP-----SPPQCDYIRPSLT 274
            .|..||...||.             .|..|.|          ||..|     ||...|.:|....
  Fly   732 QVAHVPHTIVTPFNFGDGDGAQFYGQQQQPPTGPTGPGNKSRSGDNPGMEQRSPDPTDMMRSKHL 796

Human   275 GK 276
            ||
  Fly   797 GK 798

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NCK1NP_001278928.1 SH3_Nck1_1 3..61 CDD:212833
SH3_Nck1_2 108..162 CDD:212834
SH3_Nck1_3 193..249 CDD:212837 17/67 (25%)
SH2_Nck1 280..376 CDD:198271
aruNP_722663.1 PTB_EPS8 82..215 CDD:269921
SH3_Eps8 691..744 CDD:212698 18/55 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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