DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pglym87 and pgam1b

DIOPT Version :10

Sequence 1:NP_652041.2 Gene:Pglym87 / 46246 FlyBaseID:FBgn0011270 Length:292 Species:Drosophila melanogaster
Sequence 2:NP_958457.2 Gene:pgam1b / 327165 ZFINID:ZDB-GENE-030131-5376 Length:254 Species:Danio rerio


Alignment Length:251 Identity:162/251 - (64%)
Similarity:197/251 - (78%) Gaps:1/251 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 YRIVMVRHGESEWNQKNLFCGWFDAKLSEKGQQEACAAGKALKDAKIEFDVAHTSVLTRAQETLR 106
            |::|::|||||.|||:|.|||||||.||:.|:.||...|:|||||..|||:.:||||.||..||.
Zfish     4 YKLVLIRHGESVWNQENRFCGWFDADLSDTGEAEAKRGGQALKDAGYEFDICYTSVLKRAIRTLW 68

  Fly   107 AALKSSEHKKIPVCTTWRLNERHYGGLTGLNKAETAKKFGEEKVKIWRRSFDTPPPPMEKDHEYY 171
            ..|...:...:||..|||||||||||||||||||||.|.||.:|||||||:|.|||||:.:|::|
Zfish    69 LVLDGIDQMWLPVHRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWRRSYDIPPPPMDPEHDFY 133

  Fly   172 ACIVEDPRYKDQLKPEEFPKSESLKLTIERTLPYWNEVIVPQIKDGMRVLIAAHGNSLRGVVKHL 236
            ..|.:|.||.| |..::.|..||||.||.|.||:|||.||||||:|.|||||||||||||:||||
Zfish   134 TAISKDRRYGD-LTEDQLPSCESLKDTIARALPFWNEEIVPQIKEGKRVLIAAHGNSLRGIVKHL 197

  Fly   237 ECISDKDIMSLNLPTGIPFVYELDESLKPLATLKFLGDPETVKKAMESVANQGKAK 292
            |.:|::.||.||||||||.:||||::|||:..::||||.|||:||||:||.|||||
Zfish   198 EGMSEEAIMELNLPTGIPILYELDKNLKPVKPMQFLGDEETVRKAMEAVAAQGKAK 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pglym87NP_652041.2 gpmA 42..292 CDD:184516 160/249 (64%)
pgam1bNP_958457.2 gpmA 4..253 CDD:184516 160/249 (64%)

Return to query results.
Submit another query.