DRSC/TRiP Functional Genomics Resources

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Protein Alignment vlc and dlgap5

DIOPT Version :10

Sequence 1:NP_524868.1 Gene:vlc / 46078 FlyBaseID:FBgn0259978 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_001004592.1 Gene:dlgap5 / 447853 ZFINID:ZDB-GENE-040912-160 Length:909 Species:Danio rerio


Alignment Length:656 Identity:146/656 - (22%)
Similarity:245/656 - (37%) Gaps:183/656 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 REFTANLRERCVPNLPPQPQHKTPAYVESRSSELE-HMVLSPAIVECDQEPSSNDFDETSAENSQ 105
            ||...|:| |.:..||                |:: .|..|..:...|:.|.:    :|::::|.
Zfish    34 REKIQNMR-RHLDRLP----------------EIDLSMDTSTLMATQDKAPKT----KTASDSSD 77

  Fly   106 EAPEKKPSYLNLACCVNGYSNLTTY-DSKIRQDINKSRE------------------------VS 145
            .|.|:|             ..|..| ::||.|...:.||                        .:
Zfish    78 AAEERK-------------KMLARYKENKILQKEKEKREKEKKGVFKVGLYKPQPLGYLPSNTAA 129

  Fly   146 PIRPSTSSLQYCKR-------NHFLATPTLHSMPSP----ATKCKPIEPNN---NSNDSSGNFSS 196
            |.|...:.:....|       |..||... |::|..    :|...|.:.|.   .|..:....:.
Zfish   130 PGRAKATEMNQSTRMTRSMVQNQKLAVER-HAVPKKVECLSTARAPAKENRKPLTSTKTRATTAE 193

  Fly   197 GSGHSNGNGSFIKQRVERLYGPGALAQGFYSPKKHGQSPSNAAGRSERGQVEIDSLQGSELARKF 261
            ....:....|..|...:.:..|.|..:|   ||........||..|.||:|    :||:..|...
Zfish   194 PPVRAQTTRSAAKTAPDAVVKPVADTRG---PKTRSAVKYPAAPSSGRGKV----VQGNMKANVE 251

  Fly   262 KQLSPSKDYGEFRKKMQKKCSQSTTARIDEPLHSP--------------GLNGDLDLPVF----- 307
            .:.:..||              :...:::||..:|              ||.....:|:.     
Zfish   252 NKPAEIKD--------------TAVDKVEEPKAAPASFAPQGFVFQPPVGLRSFEPVPLSPSSAN 302

  Fly   308 RHLSQEFRAQL------PTVSPKRGAPRSCMAPDVLLVDNESSPDH---GPTDEVDHESTKMDKL 363
            ..||..|.:::      |: .||.....|...|.|    :...|||   .|:.....::....:.
Zfish   303 AFLSPSFNSEVSMEPAFPS-PPKPVVSFSSPPPSV----SAHMPDHPISPPSVSSPLQAQSFPQP 362

  Fly   364 ASEEYISTSNISVEAVVKDGNFFLKILKEEQSRLLVLAALAEKYADALSTNPDISEDTFGLLRSA 428
            :::...|.|:.|:|. ..|..:|...:..|..||..|:.|.|...|..|    |.|:....:|:|
Zfish   363 STDAAPSPSSASMEP-QHDVAYFRAAMASETERLTGLSELWESRFDDAS----IPEEMRDRMRTA 422

  Fly   429 SGKARLLVSQKMKQFEGLCHN-NLNRSPEDKFPTTLDDLQGFWDMVYLQVEHVDSIFADIEKLKS 492
            .|:||||:.::..||.||..: :..|.  :|. ||..||||||||||.|||.|:..|:.:::.::
Zfish   423 VGQARLLMKERFGQFNGLVDDCDFKRG--EKI-TTCTDLQGFWDMVYFQVEDVNKKFSALKEAEA 484

  Fly   493 NDWKVKAQSVADQPDLHTIPTKTIKPSKVGVSQVKTVGKASSVRVNGSAPPPPNSAAALKREAQR 557
            .|||.:.:.|..:        :.:|...|      ..|||::    |..    .:|||..|.|..
Zfish   485 RDWKEEVKPVTKK--------RVVKKPPV------VAGKAAA----GGG----GNAAAKSRLAAI 527

  Fly   558 KLLLEMKRQRREAM---------TAAAKLNPI----------NVDADPDVPGIIGDSC----ANP 599
            |..::.|:..::|.         :::..:.|:          .|::....|..:..||    ::|
Zfish   528 KAAMKAKQAEQKATETSDKPQEDSSSVSVAPVQSVVFHGGFFQVESPVKTPAAVRRSCRGVVSSP 592

  Fly   600 SVSNGS 605
            ||:..|
Zfish   593 SVTKFS 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vlcNP_524868.1 GKAP <381..>496 CDD:460897 43/115 (37%)
dlgap5NP_001004592.1 PHA03247 <125..373 CDD:223021 51/274 (19%)
GKAP <362..506 CDD:460897 52/165 (32%)
PHA03247 <547..671 CDD:223021 9/52 (17%)

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