DRSC/TRiP Functional Genomics Resources

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Protein Alignment vlc and mars

DIOPT Version :10

Sequence 1:NP_524868.1 Gene:vlc / 46078 FlyBaseID:FBgn0259978 Length:605 Species:Drosophila melanogaster
Sequence 2:XP_061518270.1 Gene:mars / 3291284 VectorBaseID:AGAMI1_002686 Length:1445 Species:Anopheles gambiae


Alignment Length:684 Identity:143/684 - (20%)
Similarity:238/684 - (34%) Gaps:205/684 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SLD-SIGSCSLDVDADSSDISDTSGSLNFPTPVSVRDITREFTANLRERCVPNL---------PP 58
            ||| .|..||    ||.:|...::.:.|    :|:|.:.|. :..|.|   |:|         |.
Mosquito   576 SLDEKIQQCS----ADGADAVQSTAANN----ISLRRVRRS-SVRLSE---PSLDEQIDDLASPK 628

  Fly    59 QPQHKTPAYVESRSSELEHMVLSPAIVECDQEPSSNDFDETSAENSQEAPEKKPSY-LNLAC--- 119
            :.|.||..|.|...||||.:.     ..||                ..||..:|.: ||..|   
Mosquito   629 EVQEKTRFYYEKVDSELERLQ-----GLCD----------------LYAPFLEPEHELNDHCRGL 672

  Fly   120 --CVNGYSN------LTTY------------DSKIRQD------INKSREVSPIRPSTSSLQYCK 158
              ...|.:|      ||.:            |.|:|.|      :..|.::..:......|:..|
Mosquito   673 IIAAQGQTNILIKKKLTKFRELIEHYEMKWNDRKVRHDDLDGFWVMLSLDLDNLNKRFDELRSLK 737

  Fly   159 RNHFLATPTLHSMPSPATKCKPI------------EPNNNSNDSSGNFSSGSGHSNGNGSFIKQR 211
            .|::   ..|...|.|..|.|.:            :|...:..||...:.....:.......|..
Mosquito   738 ENNW---QELAPSPEPQAKTKKLRAGGGVRKREKKQPATGTKASSSVIADLIRKARQEKQKQKTT 799

  Fly   212 VERLYGPGALAQGFYSPKKH----GQSPSNAAGRSERGQVEIDSLQGSELARKFKQLSPSKDYGE 272
            ||.|...........:|:|.    |:||..::.:..|..:   ...|:.:...::|.|..::..:
Mosquito   800 VEDLEPLKETVTVVTTPEKRAVRFGKSPKRSSVQQRRSSI---CPGGTPIVSDWEQPSEPEELSK 861

  Fly   273 FRKKMQKKCSQSTTARIDEPLHSPG------------LNGDLDLPV--FRHLSQEFRAQLPTVSP 323
             |:.:..:.:|..|..:...|.:|.            |:..||.|.  .||.|   |:.:.|..|
Mosquito   862 -RRTIFPEITQQKTEDVKSILKTPKVKNGRRAKSVLFLDSGLDTPETRCRHTS---RSIVDTPKP 922

  Fly   324 KRGAPRSCMAPDVLLVDNESSPDHGPTDEVDHESTKMD--------KLASEEYI----------- 369
            |            :..::|...:|  .|.:..||..::        .|..||.:           
Mosquito   923 K------------IKFNDELEIEH--IDNLATESKPVEDETIAAQANLTQEEKVQPCSVGEGDAI 973

  Fly   370 ---STSN------------ISVEAVVKDGN-------------FFLKILKEEQSRLLVLAALAEK 406
               ||||            |:..|||:..:             |:.:.:..|..|   |..|.:.
Mosquito   974 PKTSTSNTPLRRSRRNSVRITEPAVVEPNDDPAPPKEVQEKTRFYYEKIDNEVGR---LQGLCDL 1035

  Fly   407 YADALSTNPDISEDTFGLLRSASGKARLLVSQKMKQFEGLC-HNNLNRSPEDKFPTTLDDLQGFW 470
            ||..|....::::...||:.:|.|:..:|..:|..:|..|. |..|..:..   ....|||.|||
Mosquito  1036 YAPFLEPEHELNDHCRGLIIAAQGQTNILFKKKFTKFRELIGHYELKWNDR---KVRHDDLDGFW 1097

  Fly   471 DMVYLQVEHVDSIFADIEKLKSNDWKVKAQSVADQPDLHTIPTKTIKPSKVGVSQVKTVGKASSV 535
            .|:.|.:::::..|.::..||.|:|    |..|..|:                .|.||    ..:
Mosquito  1098 VMLSLDLDNLNKRFDELRSLKENNW----QEFAPSPE----------------PQAKT----KKL 1138

  Fly   536 RVNGSAPPPPNSAAALKREAQRKLLLEMKRQRRE 569
            |..|..........|...:|...::.::.|:.|:
Mosquito  1139 RAGGGIRKREKKQPAAGTKASSSVIADLIRKARQ 1172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vlcNP_524868.1 GKAP <381..>496 CDD:460897 30/128 (23%)
marsXP_061518270.1 None

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