DRSC/TRiP Functional Genomics Resources

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Protein Alignment vlc and Dlgap3

DIOPT Version :10

Sequence 1:NP_524868.1 Gene:vlc / 46078 FlyBaseID:FBgn0259978 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_941020.1 Gene:Dlgap3 / 242667 MGIID:3039563 Length:977 Species:Mus musculus


Alignment Length:624 Identity:141/624 - (22%)
Similarity:231/624 - (37%) Gaps:176/624 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DRSLDSI-GSCSLDVDADSSDISDTSGSLNFPTPVSVRDITREFTANLRERCVPNLPPQPQHKTP 65
            ::.|::: ||...::::.:.|..|..|.....:...:|.|  :...:..:.|:|.|      ..|
Mouse   466 NQQLEAVCGSVFGELESQAVDALDLPGCFRMRSHSYLRAI--QAGCSQDDDCLPLL------AAP 522

  Fly    66 AYVESR-SSELEHMVLSPAIVECDQEP--------SSNDFDETSAENSQEAPEKKPSYLNLACCV 121
            |.|..| .|........|.|....|.|        ||.|    ||..|..|.|......:.|..:
Mouse   523 ASVSGRPGSSFNFRKAPPPIPPGSQAPPRISITAQSSTD----SAHESFTAAEGPARRCSSADGL 583

  Fly   122 NGYSNLTTYDSKIRQDINKSREVSPIRPSTSSLQYCKRNHFLATPT-----------LHSM---- 171
            :|    .|..:       ::.|::|:.|..|.          ..||           |.|:    
Mouse   584 DG----PTMGA-------RTLELAPVPPRASP----------KPPTLIIKTIPGREELRSLARQR 627

  Fly   172 ---PSPATKCKPIEPNNNSNDSSGNFSSGSGHSNGNGSFIKQRVERLYGPGALAQGFYSPKKHGQ 233
               ||...:.:.|..::..|.|...|     ||.|      .:||             ..|:..:
Mouse   628 KWRPSIGVQVETISDSDTENRSRREF-----HSIG------VQVE-------------EDKRRAR 668

  Fly   234 -SPSNAAGRSERGQVEIDSLQG-SELARKFKQLSPSKDYGEFRKKMQKKCSQ------STTARID 290
             ..||:.....:..:|::.|.| :.:|.:.|.|       :|.:..|:..|:      :.|..:.
Mouse   669 FKRSNSVTAGVQADLELEGLAGLATVATEDKAL-------QFGRSFQRHASEPQPGPRAPTYSVF 726

  Fly   291 EPLHSPG---LNGDLDLPVFRHLSQEFRAQLPTVSPKRGAPR--SCMAPDVLLVDNESSPDHGPT 350
            ..:|:.|   ......||.....:.......|..:|..|:.|  |.|..     .:.|.||.|.|
Mouse   727 RTVHTQGQWAYREGYPLPYEPPATDGSPGPTPVPAPGPGSGRRDSWMER-----GSRSLPDSGRT 786

  Fly   351 DEVDHESTKMDKLASEEYISTSNISVEAVVKDGNFFLKILKEEQSRLLVLAALAEKYADALSTNP 415
            ....                          :||.:|:|:|:.|..:|.......|:.|:    :.
Mouse   787 SPCP--------------------------RDGEWFIKMLRAEVEKLEHWCQQMEREAE----DY 821

  Fly   416 DISEDTFGLLRSASGKARLLVSQKMKQFEGLCHNNLNRSPEDKFPT-TLDDLQGFWDMVYLQVEH 479
            ::.|:....:|||.|..:||:|||::||..||..:|:.:   .||. |..||.||||::.|.:|.
Mouse   822 ELPEEILEKIRSAVGSTQLLLSQKVQQFFRLCQQSLDPT---AFPVPTFQDLAGFWDLLQLSIED 883

  Fly   480 VDSIFADIEKLKSNDWKV---KAQSVADQPDLHTIPTKTIKPSKVGVSQVKTVGKASSVRVNGSA 541
            |...|.::::||:|.||:   |.:.....|    ||.   |||:         |:        ..
Mouse   884 VTLKFLELQQLKANSWKLLEPKEEKKVPPP----IPK---KPSR---------GR--------GV 924

  Fly   542 PPPPNSAAALKREAQ--RKLLLEMKRQ---RREAMTAAA 575
            |....|..::.|:.|  ||.||..||.   |..:.|.:|
Mouse   925 PVKERSLDSVDRQRQEARKRLLAAKRAASFRHSSATESA 963

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vlcNP_524868.1 GKAP <381..>496 CDD:460897 40/115 (35%)
Dlgap3NP_941020.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 52..96
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 137..167
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 181..289
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 398..417
PHA03418 515..>607 CDD:177646 27/122 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 529..582 14/56 (25%)
GKAP 626..977 CDD:460897 102/431 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 739..788 13/53 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 906..939 10/56 (18%)
Blue background indicates that the domain is not in the aligned region.

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