DRSC/TRiP Functional Genomics Resources

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Protein Alignment vlc and DLGAP4

DIOPT Version :10

Sequence 1:NP_524868.1 Gene:vlc / 46078 FlyBaseID:FBgn0259978 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_001352550.1 Gene:DLGAP4 / 22839 HGNCID:24476 Length:992 Species:Homo sapiens


Alignment Length:674 Identity:158/674 - (23%)
Similarity:239/674 - (35%) Gaps:199/674 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RSLDSIGSCSL-----------------DVDADSSDISDTSGSLN-----FPTPVSVR--DITRE 43
            ||||.:.|..:                 |...|||.||...|..:     |.....||  :::.:
Human   414 RSLDRLDSVDMLLPSKCPSWEEDYTPVSDSLNDSSCISQIFGQASLIPQLFGHEQQVREAELSDQ 478

  Fly    44 FTANLRERC---------VPNLPPQPQHKTPAYVESRSSELEHMVLSPAIVECDQEPSSNDFDET 99
            :.|.....|         ..:||      .|:|..|||    |..|......|.||..|......
Human   479 YEAACESACSEAESTAAETLDLP------LPSYFRSRS----HSYLRAIQAGCSQEEDSVSLQSL 533

  Fly   100 -------SAENSQEAPEKKPSYLNLACCVNGYSNLTTYDSKIRQDINKSREVSPIRPSTSSLQYC 157
                   |..||:..|.        :.|:..|                .:...|:.|.|:|..: 
Human   534 SPPPSTGSLSNSRTLPS--------SSCLVAY----------------KKTPPPVPPRTTSKPF- 573

  Fly   158 KRNHFLATPTLHSMPSPATKCKPIEPNNNSNDSSGNFSSGSGHSNGNGSFIKQRVERLYGPGALA 222
                  .:.|:.|....|.     :...:|.|.....:|.||.||.:.|     ::....|.::.
Human   574 ------ISVTVQSSTESAQ-----DTYLDSQDHKSEVTSQSGLSNSSDS-----LDSSTRPPSVT 622

  Fly   223 QGFYSPKKHGQS--PSNAAGRSERGQVEIDSLQGSELARKFKQLSPSKDYGEFRKKMQKKCSQST 285
            :|..:|......  |.:||.:||:|     :|..||   ...:.:|.:.....  .:|..|.|..
Human   623 RGGVAPAPEAPEPPPKHAALKSEQG-----TLTSSE---SHPEAAPKRKLSSI--GIQVDCIQPV 677

  Fly   286 TARIDEP---LHSPGLNGDLDLPVFRHLSQEFRAQLP--TVSPKRGA--------PRSCMA---- 333
            ......|   ..|.|:          .:..::|:.:|  ::|.:|..        ..||.:    
Human   678 PKEEPSPATKFQSIGV----------QVEDDWRSSVPSHSMSSRRDTDSDTQDANDSSCKSSERS 732

  Fly   334 -PDVLLVDNESSPDHGPT---------------DEVDHESTKMDKLASEEYISTSNISVE----- 377
             ||.....|..|.|.||.               |..|...........:.::.||:.|..     
Human   733 LPDCTPHPNSISIDAGPRQAPKIAQIKRNLSYGDNSDPALEASSLPPPDPWLETSSSSPAEPAQP 797

  Fly   378 -AVVKDGNFFLKILKEEQSRLLVLAALAEKYA---DALSTNPDISEDTFGLLRSASGKARLLVSQ 438
             |..:||.:|||:|:.|..||       |.:.   |..:...::||:..|.:.||.|.|:||:||
Human   798 GACRRDGYWFLKLLQAETERL-------EGWCCQMDKETKENNLSEEVLGKVLSAVGSAQLLMSQ 855

  Fly   439 KMKQFEGLCHNNLNRSPEDKFPTTLDDLQGFWDMVYLQVEHVDSIFADIEKLKSNDW-------K 496
            |.:||.|||..|||  |:.....|..||.||||::.|.:|.:...|.::..||:|.|       |
Human   856 KFQQFRGLCEQNLN--PDANPRPTAQDLAGFWDLLQLSIEDISMKFDELYHLKANSWQLVETPEK 918

  Fly   497 VKAQSVADQPDLHTIPTKTIKPSKVGVSQVKTVGKASSVRVNGSAPPPPNSAAALKREAQRKLLL 561
            .|.:.....|    :|.|..| ||..||:.|.                 :.|:..:|:..||.||
Human   919 RKEEKKPPPP----VPKKPAK-SKPAVSRDKA-----------------SDASDKQRQEARKRLL 961

  Fly   562 EMKRQRREAMTAAAKLNPINVDAD 585
            ..||      .|:.:.|.....||
Human   962 AAKR------AASVRQNSATESAD 979

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vlcNP_524868.1 GKAP <381..>496 CDD:460897 46/124 (37%)
DLGAP4NP_001352550.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 47..66
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 157..206
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 342..396
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 527..751 54/284 (19%)
GKAP 660..992 CDD:460897 95/369 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 763..798 5/34 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 915..992 23/93 (25%)
Blue background indicates that the domain is not in the aligned region.

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