DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phb2 and Nphs2

DIOPT Version :10

Sequence 1:NP_001097372.1 Gene:Phb2 / 46038 FlyBaseID:FBgn0010551 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_570841.3 Gene:Nphs2 / 170672 RGDID:620461 Length:383 Species:Rattus norvegicus


Alignment Length:293 Identity:68/293 - (23%)
Similarity:123/293 - (41%) Gaps:59/293 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PPGLGI--GLKVLAA----VGAAAYGVSQSLYTVEGGHRAIIFSRLGG-IQSDIYSEGLHVRIPW 75
            |.|||.  .|.||::    :....:.:...:..|:...|.||| |||. :.......||...:|.
  Rat    95 PSGLGACEWLLVLSSLIFIIVTFPFSIWFCIKVVQEYERVIIF-RLGHLLPGRAKGPGLFFFLPC 158

  Fly    76 FQYPIIYDIRSRPRKIS-SPTGSKDLQMINISLRVLSRPDSLNLPYLHKQLGVDYDEKVLPSICN 139
            .......|:|.:..:|. ....:||:.::.|......|.::.:|  |...|.  :..|.:..:..
  Rat   159 LDTYHKVDLRLQTLEIPFHEVVTKDMFIMEIDAVCYYRMENASL--LLSSLA--HVSKAIQFLVQ 219

  Fly   140 EVLKSVIAKFNASQLITQRQQVSLLIRKELVERARDFNIILDDVSL--------TE-----LSFG 191
            ..:|.::|..:.::::.:|:.:           |:|..:.||.|:.        ||     |..|
  Rat   220 TTMKRLLAHRSLTEILLERKSI-----------AQDVKVALDSVTCVWGIKVERTEIKDVRLPAG 273

  Fly   192 KEYTAAIEAKQVAQQEAQRAVFFVERAKQEKQQKIVQAEGEAEAAKMLGLA---VKQNPAYLKLR 253
            .:::.|:||      ||||          :.:.:::.||||..|::.|.:|   :...||.::||
  Rat   274 LQHSLAVEA------EAQR----------QAKVRVIAAEGEKAASESLRMAAEILSGTPAAVQLR 322

  Fly   254 KLRAAQSIARTIASSQNKVYLSADSLMLNIQDS 286
            .|...||::   ....:.|.|.....|||:..|
  Rat   323 YLHTLQSLS---TDKPSTVVLPLPFDMLNLLSS 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Phb2NP_001097372.1 SPFH_prohibitin 42..236 CDD:259799 45/208 (22%)
Nphs2NP_570841.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..73
SPFH_podocin 122..344 CDD:259809 57/256 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 355..383
Blue background indicates that the domain is not in the aligned region.

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