DRSC/TRiP Functional Genomics Resources

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Protein Alignment nec and serpind1

DIOPT Version :10

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001015716.1 Gene:serpind1 / 548433 XenbaseID:XB-GENE-6085731 Length:484 Species:Xenopus tropicalis


Alignment Length:377 Identity:105/377 - (27%)
Similarity:185/377 - (49%) Gaps:27/377 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 FSSELFKEI-IKSQSQQNVVFSPFSVHALLALIYGASDGKTFRELQKAGEFSKNAMAVAQDFE-- 171
            |...|::.| ..:.:..|::.:|..:...:|.|...:.|:...::.....| ||.:..:..:|  
 Frog   119 FGFNLYRAIKNNTDASDNILLAPVGISTAMATISLGTKGQALDQVLFTLGF-KNFINASSKYEIL 182

  Fly   172 ---SVIKYKKHL-----EGADLTLATKVYYNRELGGVNHSYDEYAKFYFSAGTEAVDMQNAKDTA 228
               :|.:...|.     .|..|.....:|..::. .:...:....|.|:.|..:.||. .:||..
 Frog   183 TLHNVFRKLTHRLFRRNFGYTLRSVNDIYVKKDF-VIREPFKNNLKNYYFAEAQMVDF-GSKDFL 245

  Fly   229 AKINAWVMDTTRNKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPYDFQHTNGRISK 293
            .|.|..:...|:..|::.:  |:|||....||||.:||:|.||::|....|...:|:.....:.|
 Frog   246 TKANKRIQQLTKGLIKEAL--TNVDPALLMLLVNCIYFKGTWENKFPVEYTQNMNFRLNEKELVK 308

  Fly   294 VAMMFNDDVYGLAELPELGATALELAYKDSATSMLILLPNETTGLGKMLQQLSRPEFDLNRVAHR 358
            |.||.....:.:|..|||....|:|.|..: .||||:||::.:|: |:|::...|:. :.|..:.
 Frog   309 VPMMKTKGNFLVAADPELDCAVLQLPYVGN-ISMLIVLPHKLSGM-KLLEKQISPQV-VERWQNI 370

  Fly   359 LRRQSVAVRLPKFQFEFEQDMTEPLKNLGVHQMFTPNSQVTKLMDQPVRVSKILQKAYINVGEAG 423
            :..::..|.||:|:.|...::.|.|.|:||..:|| :...:.:.|:.:.:.....:..|.|.|.|
 Frog   371 MTNRTREVFLPRFKLEKSYNLQEVLSNMGVTDLFT-HGDFSGVSDKNMNIGLFQHQGTITVNEEG 434

  Fly   424 TEASAASYAKFVPLSLPPKPTEFVANRPFVFAV---RTPASVLFIGHVEYPT 472
            |||:|.:...|:|||...:   |||:|||:|.:   ||.. ::|:|.|..||
 Frog   435 TEAAAVTVVGFMPLSTQAR---FVADRPFLFLIYEHRTNC-LIFMGRVANPT 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 serpin42Dd-like_insects 105..471 CDD:381070 103/374 (28%)
serpind1NP_001015716.1 serpinD1_HCF2 38..484 CDD:381004 105/377 (28%)

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