DRSC/TRiP Functional Genomics Resources

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Protein Alignment nec and Spn28F

DIOPT Version :10

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster


Alignment Length:376 Identity:118/376 - (31%)
Similarity:205/376 - (54%) Gaps:31/376 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 RFSSELFKEIIKSQSQQNVVFSPFSVHALLALIYGASDGKTFRELQKAGEFSKNAMAVAQDFESV 173
            ||:.:.::.:.|..:..|::.||.||...|::.|..:..||.:|:       :|.:.:..|.:.|
  Fly    16 RFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEM-------RNVLKLPDDKKEV 73

  Fly   174 -IKYK---KHLEG----ADLTLATKVYYNRELGGVNHSYDEYAKFYFSAGTEAVDMQNAKDTAAK 230
             .|||   ..|||    |.|:||.::|.|::...| .||::..|..|.|..||:|:.:....::.
  Fly    74 AAKYKDLLSKLEGREKVATLSLANRIYVNKKFQLV-PSYNQMVKDSFMAEAEAIDIVDPNKASSI 137

  Fly   231 INAWVMDTTRNKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPYDFQHTNGRISKVA 295
            :|.||.:.||.||:|||:..|:. :.:.:::||:||:|:||::|....|...:|:.::.:...|.
  Fly   138 VNNWVDNQTRGKIKDLVSSNDMS-KMELIVLNAIYFKGQWEYKFNPKLTKKRNFRVSDQKSVPVE 201

  Fly   296 MMFNDDVYGLAELPELGATALELAYKDSATSMLILLPNETTGLGKMLQQL--SRPEFDLNRVAHR 358
            ||.....:..|...||||..:||.|::|:.||||.||::..||.::.:::  .:|         :
  Fly   202 MMSLFQSFRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVDGLSELEKKIVGFKP---------K 257

  Fly   359 LRRQSVAVRLPKFQFEFEQDMTEPLKNLGVHQMFTPNSQVTKLMDQP-VRVSKILQKAYINVGEA 422
            |.:..|.:|||||:.||...:.:.|..:|:...|..::....|::.. |.|.|::.||:|.|.|.
  Fly   258 LSKMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEKSADFKDLVENSNVHVKKVIHKAFIEVNEE 322

  Fly   423 GTEASAASYAKFVPLSLPPKPTEFV--ANRPFVFAVRTPASVLFIGHVEYP 471
            |.||:||:...||..|:|...::.|  |:.||.:.:|...::.|.||...|
  Fly   323 GAEAAAATALLFVRYSMPMPSSQMVFNADHPFAYVIRDRETIYFQGHFVKP 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 serpin42Dd-like_insects 105..471 CDD:381070 117/374 (31%)
Spn28FNP_524957.2 serpin42Dd-like_insects 12..373 CDD:381070 117/374 (31%)

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