DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nec and Serpinb9b

DIOPT Version :10

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001333297.1 Gene:Serpinb9b / 306892 RGDID:1562844 Length:296 Species:Rattus norvegicus


Alignment Length:289 Identity:76/289 - (26%)
Similarity:136/289 - (47%) Gaps:9/289 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 LQKAGEFSKNAMAVAQDFESVIKYKKHLEGADLTLATKVYYNRELGGVNHSYDEYAKFYFSAGTE 217
            |.|.|:..:....:   |:.:.|.:::.   .|.:|..::.::....:....:...:||.|...:
  Rat    10 LSKKGDIHRGFQLL---FKKLNKSERYF---SLRMANGIFVDKTCEVLPTFKESCLRFYNSEMEQ 68

  Fly   218 AVDMQNAKDTAAKINAWVMDTTRNKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPY 282
            ....:.|:::...:|.||...|..||.:|:....||.||:.:||||:|.:..|..:|....|...
  Rat    69 LSFAEAAEESRKHVNTWVSKQTEGKIPELLPDDSVDFQTRLVLVNALYLKATWGRQFDEGSTREM 133

  Fly   283 DFQHTNGRISKVAMMFNDDVYGLAELPELGATALELAYKDSATSMLILLPNETTGLGKMLQQLSR 347
            .|:........|.||:.:.::....:.|:.|:.|.:.||......|:|||:|:..:.|:.::|:.
  Rat   134 PFKINKNETRPVQMMYQEGIFCYKYVKEVPASLLMIPYKGDELCFLVLLPDESVDISKVEEELTF 198

  Fly   348 PEFDLNRVAHRLRRQSVAVRLPKFQFEFEQDMTEPLKNLGVHQMFTPNSQVTKLM--DQPVRVSK 410
            .:.........:....|.|.||||:.|.:.|:...|:.||:...|.........|  ::.:.|||
  Rat   199 EKLTAWTQPDTMSYTHVEVFLPKFKLEEDYDLKSLLQRLGIVDAFEETKADLSAMAPERNLCVSK 263

  Fly   411 ILQKAYINVGEAGTE-ASAASYAKFVPLS 438
            .:.|:.:.|.|.||| |:|||....||||
  Rat   264 FVHKSVVEVNEKGTEAAAAASSVNIVPLS 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 serpin42Dd-like_insects 105..471 CDD:381070 76/289 (26%)
Serpinb9bNP_001333297.1 serpin 7..293 CDD:476815 76/289 (26%)

Return to query results.
Submit another query.