DRSC/TRiP Functional Genomics Resources

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Protein Alignment nec and Serpinb1b

DIOPT Version :10

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_038952280.1 Gene:Serpinb1b / 306891 RGDID:1560658 Length:380 Species:Rattus norvegicus


Alignment Length:376 Identity:114/376 - (30%)
Similarity:190/376 - (50%) Gaps:20/376 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 FSSELFKEIIKSQSQQNVVFSPFSVHALLALIY-GASDGKTFRELQKAGEFSKNAMA-VAQDFES 172
            |:.|||..:.:|....| :|||||:.:.||::: ||........|:.|..|..:::. :...|:|
  Rat    11 FALELFHTLSESSPTGN-IFSPFSISSALAMVFLGAKGSSAPSSLRLAETFHFDSVEDIHSRFQS 74

  Fly   173 V-IKYKKHLEGADLTLATKVYYNRELGGVNHSYDEYAKFYFSAGTEAVDMQNAKDTAAK-INAWV 235
            : .:.:||.....|.:|.::|..:....:........|.| .|....||.|:|.:.|.| ||.||
  Rat    75 LNAEMRKHGASHTLKVANRLYGEKTYNFLPEFLASTQKMY-GADLAPVDFQHASEDARKEINKWV 138

  Fly   236 MDTTRNKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPYDFQHTNGRISKVAMMFND 300
            ...|..||.:|:....|:..|:.:||||:||:|.|:.:|.|..|:...|:........|.||:..
  Rat   139 KGQTEGKIPELLAGGVVNSTTKLVLVNAIYFKGIWQEKFLTRHTTDAPFRLNKKDTKMVKMMYQK 203

  Fly   301 DVYGLAELPELGATALELAYKDSATSMLILLP----NETTGLGKMLQQLSRPEFDLNRVAHRLRR 361
            :.:....:|:|....||:.|:....||:||||    :|:|||.|:.:||:..:.........|:.
  Rat   204 EKFPFGYIPDLKCKVLEMPYQGGELSMVILLPEDIEDESTGLQKIEEQLTLEKLYEWTKHENLKE 268

  Fly   362 QSVAVRLPKFQFEFEQDMTEPLKNLGVHQMFTPNSQVTKLMDQ--PVRVSKILQKAYINVGEAGT 424
            ..|.|.||||:.|....:...|..||:..:|:.:......|.:  .:.:|||:.|:::.|.|.||
  Rat   269 IDVHVNLPKFKIEESYILNSNLGRLGLQDLFSSSKADLSGMSESRDIFISKIVHKSFVEVNEEGT 333

  Fly   425 EASAAS--YAKFVPLSLPPKPTEFVANRPFVFAVR--TPASVLFIGHVEYP 471
            ||:||:  ..::..:|:    ..|:.:.||:|.:|  ..|::||.|.|..|
  Rat   334 EAAAATAGLVEYCLVSI----EAFIVDHPFLFFIRHNPTANMLFFGRVCSP 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 serpin42Dd-like_insects 105..471 CDD:381070 113/374 (30%)
Serpinb1bXP_038952280.1 serpinB1_LEI 1..380 CDD:381028 113/374 (30%)

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