DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nec and Serpina3b

DIOPT Version :10

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_766612.1 Gene:Serpina3b / 271047 MGIID:2182835 Length:420 Species:Mus musculus


Alignment Length:365 Identity:92/365 - (25%)
Similarity:168/365 - (46%) Gaps:36/365 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 FSSELFKEIIKSQSQQNVVFSPFSV-HALLALIYGASDGKTFRELQKAGEFSKNAMAVA---QDF 170
            |:...:||:......:|:.||||.: .||.:|..||. |.|..|:.:..:|:....:.|   |.|
Mouse    54 FAFSFYKELALKNPHKNIAFSPFGIATALNSLTLGAK-GNTLEEILEVLKFNLTETSEADIHQGF 117

  Fly   171 ESVIKYKKHLEGADLTLAT--KVYYNRELGGVNHSYDEYAKFYFSAGTEAVDMQNAKDTAAKINA 233
            :.:::...| .|..:.:.|  .::..:.| .:...:.|.|:..:.......:.|...:....||:
Mouse   118 KHLLQRLSH-PGDQVQIRTGNALFVEKHL-QILAEFKEKARALYHTEVFTANFQQPHEAMKLINS 180

  Fly   234 WVMDTTRNKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPYDFQHTNGRISKVAMM- 297
            ::.:.|:.||::||  :|:|..|..::||.::|:..|...|.:.||....|.....|..||.|| 
Mouse   181 YMSNQTQGKIKELV--SDMDGNTSMVIVNDLFFKAEWMVPFNSDDTFMGKFIVDRSRHVKVPMMK 243

  Fly   298 --------FNDDVYGLAELPELGATALELAYKDSATSMLILLPNETTGLGKMLQ-QLSRPEFDLN 353
                    |.|:        ||..|.:||.||.:..:|.| ||::    |||.| :.|.....|.
Mouse   244 TKNLRTPYFRDE--------ELKCTVVELNYKGNGKAMFI-LPDQ----GKMQQVEASLQPGTLK 295

  Fly   354 RVAHRLR-RQSVAVRLPKFQFEFEQDMTEPLKNLGVHQMFTPNSQVTKLMD-QPVRVSKILQKAY 416
            :....|| |:...:.||||......::.:.|..||:.::|:..:.::.:.. :.:.||:::....
Mouse   296 KWRKSLRPRKIKELHLPKFSLSQHYNLEDILPELGIRELFSTQADLSGITGVKNITVSEMIHSTE 360

  Fly   417 INVGEAGTEASAASYAKFVPLSLPPKPTEFVANRPFVFAV 456
            :::.|.|||..|.:...:..:|...||........|::.|
Mouse   361 LDMTEKGTEGDAITIVGYNFMSAKLKPVFVKFEDQFLYIV 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 serpin42Dd-like_insects 105..471 CDD:381070 92/365 (25%)
Serpina3bNP_766612.1 serpinA3_A1AC 37..418 CDD:381019 92/365 (25%)
RCL 367..392 7/24 (29%)

Return to query results.
Submit another query.