DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nec and Serpinf1

DIOPT Version :10

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_035470.3 Gene:Serpinf1 / 20317 MGIID:108080 Length:417 Species:Mus musculus


Alignment Length:449 Identity:106/449 - (23%)
Similarity:192/449 - (42%) Gaps:89/449 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 WT--------QNNQEAISDVVAVDLTKREPVTP-------PPNRPPPVFSYMDRFSSELFKEIIK 120
            ||        ..|..:.|:...|..:..|||..       |.|:   :.:.:..|..:|::....
Mouse     9 WTGALLGHGSSQNVPSSSEGSPVPDSTGEPVEEEDPFFKVPVNK---LAAAVSNFGYDLYRLRSS 70

  Fly   121 SQSQQNVVFSPFSV-HALLALIYGASDGKTFRELQKAGEFSKNAMAVAQDFESVIKYKKHLEGA- 183
            :....||:.||.|| .||.||..|| :.:|...:.:|..:.   :....|..|.  ||:.|... 
Mouse    71 ASPTGNVLLSPLSVATALSALSLGA-EHRTESVIHRALYYD---LITNPDIHST--YKELLASVT 129

  Fly   184 ----DLTLATKVYYNREL-------GGVNHSYDEYAKFYFSAGTEAVDMQNAKDTAAKINAWVMD 237
                :|..|:::.:.|:|       ..:..||....:..  .|...||:|       :||.||..
Mouse   130 APEKNLKSASRIVFERKLRVKSSFVAPLEKSYGTRPRIL--TGNPRVDLQ-------EINNWVQA 185

  Fly   238 TTRNKI----RDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPYDFQHTNGRISKVAMMF 298
            ..:.||    |::.:...:      ||:...||:|:|..:|.:..|:..||.....|..:|.||.
Mouse   186 QMKGKIARSTREMPSALSI------LLLGVAYFKGQWVTKFDSRKTTLQDFHLDEDRTVRVPMMS 244

  Fly   299 NDDV---YGL--------AELPELGATALELAYKDSATSMLILLPNETTGLGKMLQQLSRPEF-- 350
            :...   |||        |:||..|           :.|::..||...|....|:::....||  
Mouse   245 DPKAILRYGLDSDLNCKIAQLPLTG-----------SMSIIFFLPLTVTQNLTMIEESLTSEFIH 298

  Fly   351 DLNRVAHRLRRQSVAVRLPKFQFEFEQDMTEPLKNLGVHQMFTPNSQVTKLMDQPVRVSKILQKA 415
            |::|   .|:.....:.:||.:..||.::|:.|:::.:..:| .:...:|:..:||:::::..:|
Mouse   299 DIDR---ELKTIQAVLTVPKLKLSFEGELTKSLQDMKLQSLF-ESPDFSKITGKPVKLTQVEHRA 359

  Fly   416 YINVGEAGTEASAASYAKFVPLSLPPKPTEFVANRPFVFAVR--TPASVLFIGHVEYPT 472
            .....|.|..:|.:...:.|.|:.   |.::..|:||:|.:|  ...::||||.:..|:
Mouse   360 AFEWNEEGAGSSPSPGLQPVRLTF---PLDYHLNQPFLFVLRDTDTGALLFIGRILDPS 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 serpin42Dd-like_insects 105..471 CDD:381070 95/397 (24%)
Serpinf1NP_035470.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 17..41 6/23 (26%)
serpinF1_PEDF 40..412 CDD:381008 97/413 (23%)

Return to query results.
Submit another query.