DRSC/TRiP Functional Genomics Resources

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Protein Alignment nec and srp-7

DIOPT Version :10

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001122924.1 Gene:srp-7 / 179195 WormBaseID:WBGene00005648 Length:373 Species:Caenorhabditis elegans


Alignment Length:370 Identity:102/370 - (27%)
Similarity:176/370 - (47%) Gaps:51/370 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 QQNV----VFSPFSVHALLALIYGASDGKTFRELQKAGEFSKNAMAVAQDFESVIKYKKHLE-GA 183
            |||:    .|||.|:...|:|::.|:.|:|..::::|.........:.|.|.::.......| |.
 Worm    25 QQNISESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGT 89

  Fly   184 DLTLATKVYYNRELGGVNHSYDEYAKFYFSAGTEAVDMQNAKDTAAKINAWVMDTTRNKIRDLVT 248
            ::.||..| :.|....:..||.:..|..::||..::|..|.:.||..||.:|.:.|.:.|:.::.
 Worm    90 EVKLANHV-FTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIG 153

  Fly   249 PTDVDPQTQALLVNAVYFQGRWEHEFATMDT------------SPYDFQHTNGRISKVAMMF-ND 300
            ...::....|:|.||:||:..|:::|....|            ...||.|.    |.|:..: .:
 Worm   154 SDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHA----SSVSRDYAEN 214

  Fly   301 DVYGLAELPELGATALELAYKDSATSMLILLPNETTGLGKMLQQLSRPEFDLNRVAHRLRR---Q 362
            |.:.:..||          |||:..::.|.||....||.:.|:.|     |...:.|.|..   .
 Worm   215 DQFQVLSLP----------YKDNTFALTIFLPKTRFGLTESLKTL-----DSATIQHLLSNVSST 264

  Fly   363 SVAVRLPKFQFEFEQDMTEPLKNLGVHQMFTPNSQVTKLMDQPVRVSKILQKAYINVGEAGTEAS 427
            ||.|::||::.|.:..:.|.|::||:.:.|..::.:..:.| .:.|||:..||.|.|.|.||:|:
 Worm   265 SVNVQIPKWKIETKLGLEEALQSLGIKKAFDNDADLGNMAD-GLYVSKVTHKALIEVDEEGTKAA 328

  Fly   428 AASYAKFVPLSLP------PKPTEFVANRPFVFAVRTPASVLFIG 466
            ||:   .|.:||.      .:|.:|.|:.||.|.:......||:|
 Worm   329 AAT---TVSISLKSAMFVMEEPKDFTADHPFFFVLSKDNHPLFVG 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 serpin42Dd-like_insects 105..471 CDD:381070 102/370 (28%)
srp-7NP_001122924.1 serpinL_nematode 14..372 CDD:381047 102/370 (28%)

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