DRSC/TRiP Functional Genomics Resources

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Protein Alignment ix and med29

DIOPT Version :10

Sequence 1:NP_610677.1 Gene:ix / 45881 FlyBaseID:FBgn0001276 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_001072872.1 Gene:med29 / 780334 XenbaseID:XB-GENE-1006668 Length:188 Species:Xenopus tropicalis


Alignment Length:189 Identity:63/189 - (33%)
Similarity:91/189 - (48%) Gaps:34/189 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 MQVMQSSPS-------------GPPGPVQHQQQQPPQPLQQQQQAEKLDNISRVKSLLGPLRESM 67
            |.:.||.|.             ||..||..||||    |..|||.:..|.:.|.:.|:..|:||:
 Frog     3 MLLNQSQPPQGREGGGTQVGSLGPGIPVGQQQQQ----LGLQQQQQDFDPVQRYRMLIPQLKESL 63

  Fly    68 FLTIRSSAFALQQNNLADNLKRDTGAHHVPRFDKHLEDFYACCDQIEIHLKTAMQCLQQQNSSNH 132
            ...::.:|..|.||...||.:::... .|.||||.||:|||.|||:|:.|:.|.:||.|...|..
 Frog    64 QNLMKIAAQNLVQNTNIDNGQKNADG-LVQRFDKSLEEFYAICDQLELCLRLAYECLSQSYDSAK 127

  Fly   133 YLPGPVTPMRMETFMPDNAGP-------ISYPTYLNTVRVHIQSAKDIHDTLISAAQNI 184
            :.|         |.:|....|       :.|..||:.::..|..|||||:.|:..::.|
 Frog   128 HSP---------TLVPTATKPDAVQTESLPYTQYLSMIKSQISCAKDIHNALLECSKKI 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ixNP_610677.1 Med29 49..185 CDD:431937 47/143 (33%)
med29NP_001072872.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 5/23 (22%)
Med29 45..177 CDD:431937 46/141 (33%)

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