DRSC/TRiP Functional Genomics Resources

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Protein Alignment bel and Ddx17

DIOPT Version :10

Sequence 1:NP_001262379.1 Gene:bel / 45826 FlyBaseID:FBgn0263231 Length:801 Species:Drosophila melanogaster
Sequence 2:NP_001359065.1 Gene:Ddx17 / 315133 RGDID:1304945 Length:652 Species:Rattus norvegicus


Alignment Length:635 Identity:232/635 - (36%)
Similarity:322/635 - (50%) Gaps:99/635 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 GGNRSYNNRGERGGGGYNSRWKEGGGSNVDYTKLGARDERLEVELFGVGNTGINFDK-------- 277
            ||.....:| :|..||:.:|    |||.:...|.|...|||..:.:.:.... .|:|        
  Rat     3 GGGFGDRDR-DRDRGGFGAR----GGSGLPPKKFGNPGERLRKKKWDLSELP-KFEKNFYVEHPE 61

  Fly   278 ------YE--------DIPVEATGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPI 328
                  ||        :|.|.. |...|..:.:|......:.:.:.:....:.:|||:|....|:
  Rat    62 VARLTPYEVDELRRKKEITVRG-GDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPL 125

  Fly   329 IINGRDLMACAQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQ 393
            .::|||::..||||||||.|:|:|.:   ..:.|.|       |..|...|:.||||||||||.|
  Rat   126 ALSGRDMVGIAQTGSGKTLAYLLPAI---VHINHQP-------YLERGDGPICLVLAPTRELAQQ 180

  Fly   394 IFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVL 458
            :.:.|..:...||::...:|||.....|:|:|:||..:.:||||||.|.:..||..|....:|||
  Rat   181 VQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVL 245

  Fly   459 DEADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFLSNYIFLAVGRVG-S 522
            ||||||||||||||||:||:|:.    ..|||||:|||:||::::||.|||.:|..:.||.:. |
  Rat   246 DEADRMLDMGFEPQIRKIVDQIR----PDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELS 306

  Fly   523 TSENITQTILWVYEPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVETKKGADSLEEFLYQCNHPVT 587
            .:.||.|.:....|.:|...|:.|:..|.    ..|::.|:||||||:..|.|...:.:...|..
  Rat   307 ANHNILQIVDVCMESEKDHKLIQLMEEIM----AEKENKTIIFVETKRRCDDLTRRMRRDGWPAM 367

  Fly   588 SIHGDRTQKEREEALRCFRSGDCPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGR 652
            .||||::|.||:..|..||||..|||:||.||:||||:..||.|||:|.|:..|:||||||||.|
  Rat   368 CIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTAR 432

  Fly   653 MGNLGVATSFFNEKNRNICSDLLELLIETKQEI-PSFMEDMSSDRGHGGAKRAGRGGGGRYGGGF 716
            ..|.|.|.:||...|.....:|:::|.|..|.| |..|:.:..           |||||  |||.
  Rat   433 STNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDH-----------RGGGG--GGGK 484

  Fly   717 GSRD-YRQSSGGGGGG---RSGPPPRSGGSGSGG--GGGSYR----------SNGNSYGK----F 761
            |.|. ||.:|......   :.....|..|...||  ...|||          :||:.||.    |
  Rat   485 GGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSTSYRDRSETDRASYANGSGYGSPNSAF 549

  Fly   762 GGNSGGGGYYGGGAGGGSYG-----------GSYGG------GSASHSSN 794
            |..:|...|..|..|..:||           |:||.      |.:|.||:
  Rat   550 GAQAGQYTYAQGTYGAAAYGTSGYTAQEYAAGTYGASSTTSTGRSSQSSS 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
belNP_001262379.1 DEADc_DDX3 275..522 CDD:350809 105/269 (39%)
SF2_C_DEAD 527..663 CDD:350174 61/135 (45%)
Ddx17NP_001359065.1 DEAD-like_helicase_N 32..502 CDD:475120 195/502 (39%)

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