DRSC/TRiP Functional Genomics Resources

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Protein Alignment bel and Ddx4

DIOPT Version :10

Sequence 1:NP_001262379.1 Gene:bel / 45826 FlyBaseID:FBgn0263231 Length:801 Species:Drosophila melanogaster
Sequence 2:XP_063137794.1 Gene:Ddx4 / 310090 RGDID:1308793 Length:743 Species:Rattus norvegicus


Alignment Length:748 Identity:305/748 - (40%)
Similarity:415/748 - (55%) Gaps:84/748 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 GSADYSGPITSKTSTNSVTGGVYVP-----PHLRGGGGNN-NAADAES-------QGQGQGQGQG 75
            |..|:...|. |...:|     |||     .:..|..|:. |...|.|       .|:......|
  Rat    12 GDEDWEAEIL-KPHVSS-----YVPVFEKDKYSSGANGDTFNRTSASSSEMEDGPSGRDHFMRSG 70

  Fly    76 FDS--RSGN---PRQETRDPQQSRGGGGEYRRGGGGGGRGFNRQSGDYGYGSGGGGRRGGGGRFE 135
            |.|  ..||   .....|:...:.||.|   ||.|.|.|||  .:..:..|...|..:......|
  Rat    71 FSSGRNLGNRDIGESSKRETTSTTGGFG---RGKGFGNRGF--LNNKFEEGDSSGFWKESTNDCE 130

  Fly   136 DNYNGGEFDSRRGG--DWNRSGGGGGGGRGFGRGPSYRGGGGGSGSNLNEQTAEDGQAQQQQQPR 198
            |........|:|||  |.|.|...|...|| ||| |:||..||.|  |....:|..|.|..|  |
  Rat   131 DTQTRSRGFSKRGGYPDGNDSEASGPFRRG-GRG-SFRGCRGGFG--LGRPNSEYDQDQGSQ--R 189

  Fly   199 NDRWQEPERPAGFDG------------SEGGQSAGGNRSYNNRGERGGGGYNSRWK---EGG--- 245
            ........:||..|.            |..|...||.:..|.....|.|  .:.||   |||   
  Rat   190 GGGLFGSRKPAASDSVQCFTGSGDTFQSRSGNGRGGYKGLNEEVVTGSG--KNSWKSEAEGGESS 252

  Fly   246 ---GSNVDYTKLGARDERLEVELFGVGNTGINFDKYEDIPVEATGQNVPPNITSFDDVQLTEIIR 307
               |..|.|......::  |..:|....||||||||:.|.||.:|.:.||.|.:|::..|.:.:.
  Rat   253 DIQGPKVTYIPPPPPED--EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLN 315

  Fly   308 NNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQY 372
            ||:|.|.|.|.|||||::|||::.|||||||||||||||||||:|||..|...|      .|...
  Rat   316 NNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDG------ITASR 374

  Fly   373 SRRKQYPLGLVLAPTRELATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPG 437
            .:..|.|..:::||||||..||:.||:||::.:.:|..|:|||......:|::.:||:::.||||
  Rat   375 FKELQEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATPG 439

  Fly   438 RLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQ 502
            ||.|:|.:.|:||:.:::||||||||||||||.|::::::....||...|||||:||||||::||
  Rat   440 RLMDIIGKEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQ 504

  Fly   503 ELASDFL-SNYIFLAVGRVGSTSENITQTILWVYEPDKRSYLLDLLSSIRDGPEYTKDSLTLIFV 566
            .||.:|| |||:|:|||:||....::.|:||.|.:..||..|:::|.:|       .|..|::||
  Rat   505 RLAGEFLKSNYLFVAVGQVGGACRDVQQSILQVGQYSKREKLVEILRNI-------GDERTMVFV 562

  Fly   567 ETKKGADSLEEFLYQCNHPVTSIHGDRTQKEREEALRCFRSGDCPILVATAVAARGLDIPHVKHV 631
            ||||.||.:..||.|.....|||||||.|:|||:||..||.|.||:||||:||||||||.:|:||
  Rat   563 ETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHV 627

  Fly   632 INFDLPSDVEEYVHRIGRTGRMGNLGVATSFFN-EKNRNICSDLLELLIETKQEIPSFMEDMS-S 694
            |||||||.::|||||||||||.||.|.|.|||: |.:.::...|:::|.:.:|::|:::|::: |
  Rat   628 INFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDTESDNHLAQPLVKVLSDAQQDVPAWLEEIAFS 692

  Fly   695 DRGHGGAKRAGRGGGGRYGGGFGSRDYRQSSGG 727
            .........:.|      |..|.|.|.|::..|
  Rat   693 SYAPPSFSNSTR------GAVFASVDTRKNFQG 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
belNP_001262379.1 DEADc_DDX3 275..522 CDD:350809 127/247 (51%)
SF2_C_DEAD 527..663 CDD:350174 78/135 (58%)
Ddx4XP_063137794.1 None

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