DRSC/TRiP Functional Genomics Resources

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Protein Alignment bel and Ddx23

DIOPT Version :10

Sequence 1:NP_001262379.1 Gene:bel / 45826 FlyBaseID:FBgn0263231 Length:801 Species:Drosophila melanogaster
Sequence 2:NP_001100263.2 Gene:Ddx23 / 300208 RGDID:1308685 Length:819 Species:Rattus norvegicus


Alignment Length:608 Identity:188/608 - (30%)
Similarity:282/608 - (46%) Gaps:127/608 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 NLNEQTAEDGQAQQQQQPRNDRWQEPERPA-GFDGSEGGQSAGGNRSYNNR----GERGGGGYNS 239
            :|..:..||    .|::.|.:|.:..||.. |.:..||.|.....:..:..    .||..||...
  Rat   199 DLGRKMLED----PQERERRERRERMERETNGNEDEEGRQKIREEKDKSKELHAIKERYLGGIKK 259

  Fly   240 R--------------WKEGGGSNVDYTKLGARDERLEVELFGVG-NTGINF-------------- 275
            |              |.....:::||..|  ..||.:|:|.|.| ..||:.              
  Rat   260 RRRTRHLNDRKFVFEWDASEDTSIDYNPL--YKERHQVQLLGRGFIAGIDLKQQKREQSRFYGDL 322

  Fly   276 ------------------------------DKY------------------EDIPVEATGQNVPP 292
                                          |::                  ||..:...|..:|.
  Rat   323 MEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPN 387

  Fly   293 NITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPILNQM 357
            .|.|:.|..|...|...:....|.:|||:|:.||||.:..||::..|:||||||||||:|:|..:
  Rat   388 PIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWI 452

  Fly   358 YELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQM 422
            ..|     |:..| .....|.|..::||||||||.||.||..||.....:|...:.||.:..:|.
  Rat   453 TTL-----PKIDR-IEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQG 511

  Fly   423 RELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQ 487
            ..|..||.:::||||||.|::....:.|....::||||||||:||||||.:::|:|  :||.:.|
  Rat   512 FRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILE--HMPVSNQ 574

  Fly   488 ------------------------RQTLMFSATFPKQIQELASDFLSNYIFLAVGRVGSTSENIT 528
                                    |||:||:||.|..::.||..:|.....:.:|..|...|.:.
  Rat   575 KPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVE 639

  Fly   529 QTILWVYEPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVETKKGADSLEEFLYQCNHPVTSIHGDR 593
            |.:..:.|.:||..||.:|....|.|       .:|||..|||.|.|.:.|.:..:...::||.:
  Rat   640 QKVFLMSESEKRKKLLAILEQGFDPP-------IIIFVNQKKGCDVLAKSLEKMGYNACTLHGGK 697

  Fly   594 TQKEREEALRCFRSGDCPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNLGV 658
            .|::||.||...::|...|||||.||.||:||..|..|:|:|:..::|:|:||||||||.|..||
  Rat   698 GQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGV 762

  Fly   659 ATSFFNEKNRNICSDLLELLIET 681
            |.:|..:::..:..:|.:.::|:
  Rat   763 AITFLTKEDSAVFYELKQAILES 785

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
belNP_001262379.1 DEADc_DDX3 275..522 CDD:350809 99/332 (30%)
SF2_C_DEAD 527..663 CDD:350174 55/135 (41%)
Ddx23NP_001100263.2 SF-CC1 79..>207 CDD:273721 1/7 (14%)
SrmB 391..782 CDD:440279 152/405 (38%)

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