DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bel and Ddx5

DIOPT Version :10

Sequence 1:NP_001262379.1 Gene:bel / 45826 FlyBaseID:FBgn0263231 Length:801 Species:Drosophila melanogaster
Sequence 2:NP_001007614.1 Gene:Ddx5 / 287765 RGDID:619906 Length:615 Species:Rattus norvegicus


Alignment Length:610 Identity:208/610 - (34%)
Similarity:313/610 - (51%) Gaps:90/610 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 NDRWQEPERPAG---FDGSEGGQSAGGNRSYNNRGERGGGGYNSRWKEGGGSNVD---------- 250
            :||.:..:|..|   |.||..|..:|  :.:.|.||:   ....:|      |:|          
  Rat     6 SDRDRGRDRGFGAPRFGGSRTGPLSG--KKFGNPGEK---LVKKKW------NLDELPKFEKNFY 59

  Fly   251 --YTKLGARDERLEVELFGVGNTGINFDKYEDIPVEATGQNVPPNITSFDDVQLTEIIRNNVALA 313
              :..| ||....||:         .:.:.::|.|.  |.|.|..:.:|.:......:.:.:|..
  Rat    60 QEHPDL-ARRTAQEVD---------TYRRSKEITVR--GHNCPKPVLNFYEANFPANVMDVIARQ 112

  Fly   314 RYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQY 378
            .:.:||.:|....|:.::|.|::..||||||||.::|:|.:   ..:.|.|       :..|...
  Rat   113 NFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI---VHINHQP-------FLERGDG 167

  Fly   379 PLGLVLAPTRELATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMI 443
            |:.||||||||||.|:.:.|.::....|::...:|||.....|:|:|:||..:.:||||||.|.:
  Rat   168 PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFL 232

  Fly   444 TRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDF 508
            ..||..|....:|||||||||||||||||||:||:|:.    ..|||||:|||:||::::||.||
  Rat   233 ECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIR----PDRQTLMWSATWPKEVRQLAEDF 293

  Fly   509 LSNYIFLAVGRVG-STSENITQTILWVYEPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVETKKGA 572
            |.:||.:.:|.:. |.:.||.|.:...::.:|...|:.|:..|..    .|::.|::|||||:..
  Rat   294 LKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMS----EKENKTIVFVETKRRC 354

  Fly   573 DSLEEFLYQCNHPVTSIHGDRTQKEREEALRCFRSGDCPILVATAVAARGLDIPHVKHVINFDLP 637
            |.|...:.:...|...||||::|:||:..|..|:.|..|||:||.||:||||:..||.|||:|.|
  Rat   355 DELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYP 419

  Fly   638 SDVEEYVHRIGRTGRMGNLGVATSFFNEKNRNICSDLLELLIETKQEIPSFMEDMSSDRGHGGAK 702
            :..|:|:||||||.|....|.|.:||...|....|||:.:|.|..|.|...:..:..|||.|.::
  Rat   420 NSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGSGRSR 484

  Fly   703 RAGRGGGGRYGGGFGSRDYRQSSGGGGGGRSGPPPRSGGSGSGGGGGSYRSNGN---SYGK---- 760
              |||         |.:|.|:.              ...:|..||..::|...|   .|..    
  Rat   485 --GRG---------GMKDDRRD--------------RYSAGKRGGFNTFRDRENYDRGYSSLLKR 524

  Fly   761 -FGGNSGGGGYYGGGAGGGSYGGSY 784
             ||..:..|.|.......||:|.::
  Rat   525 DFGAKTQNGVYSAANYTNGSFGSNF 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
belNP_001262379.1 DEADc_DDX3 275..522 CDD:350809 98/247 (40%)
SF2_C_DEAD 527..663 CDD:350174 55/135 (41%)
Ddx5NP_001007614.1 DEAD-like_helicase_N 6..507 CDD:475120 198/566 (35%)
P68HR 498..532 CDD:429808 8/33 (24%)
P68HR 551..583 CDD:429808
Blue background indicates that the domain is not in the aligned region.

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