DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bel and sum3

DIOPT Version :10

Sequence 1:NP_001262379.1 Gene:bel / 45826 FlyBaseID:FBgn0263231 Length:801 Species:Drosophila melanogaster
Sequence 2:NP_588033.1 Gene:sum3 / 2538689 PomBaseID:SPCC1795.11 Length:636 Species:Schizosaccharomyces pombe


Alignment Length:804 Identity:345/804 - (42%)
Similarity:437/804 - (54%) Gaps:188/804 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LEQQVAGLDLNGGSADYSGPITSK-TSTNSVTGGVYVPPHLRGGGGNNNAADAESQGQGQ--GQG 73
            ::|||          |..|.:|.| ..||......|:||..|         |..|.|...  |..
pombe     5 VQQQV----------DSVGSVTEKLQKTNISRPRKYIPPFAR---------DKPSAGAAPAVGDD 50

  Fly    74 QGFDSRSGNPRQETRDPQQSRGGGGEYRRGGGGGGRGFNRQSGDYGYGSGGGGRRGGGGRFEDNY 138
            :...||..:..|...:...:.||..||.||            |.||         ||.|| ::||
pombe    51 ESVSSRGSSRSQTPSEFSSNYGGRREYNRG------------GHYG---------GGEGR-QNNY 93

  Fly   139 NGGEFDSRRGGDWNRSGGGGGGGRGFGRGPSYRGGGGGSGSNLNEQTAEDGQAQQQQQPRNDRWQ 203
            .||    |.||..|  |||....||||                                      
pombe    94 RGG----REGGYSN--GGGYRNNRGFG-------------------------------------- 114

  Fly   204 EPERPAGFDGSEGGQSAGGNRSYNNRGERGGGGYNSRWKEGGGSNVDYTKLGARDERLEVELFGV 268
                                                :|::  |.:|    :|||:..||.:|||.
pombe   115 ------------------------------------QWRD--GQHV----IGARNTLLERQLFGA 137

  Fly   269 ------GNTGINFDKYEDIPVEATGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIP 327
                  .:|||||:||:|||||.:|.::.| :..|....|...:..|:.|:.|.:||||||::||
pombe   138 VADGTKVSTGINFEKYDDIPVEVSGGDIEP-VNEFTSPPLNSHLLQNIKLSGYTQPTPVQKNSIP 201

  Fly   328 IIINGRDLMACAQTGSGKTAAFLVPILNQMYELG--HVPPPQSTRQ-YSRRKQYPLGLVLAPTRE 389
            |:.:||||||||||||||||.||.|||:..::.|  .||..|.... |..||.||..|:||||||
pombe   202 IVTSGRDLMACAQTGSGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLILAPTRE 266

  Fly   390 LATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIR 454
            |..||.||::||.|||.:||..:|||.:...|:|::|:||.|:.||||||.|:|.||::.|.||:
pombe   267 LVCQIHEESRKFCYRSWVRPCAVYGGADIRAQIRQIDQGCDLLSATPGRLVDLIDRGRISLANIK 331

  Fly   455 FLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFLSNYIFLAVGR 519
            ||||||||||||||||||||.|||..:|....:|||||||||||:.||.||.|||.:|:||:|||
pombe   332 FLVLDEADRMLDMGFEPQIRHIVEGADMTSVEERQTLMFSATFPRDIQLLARDFLKDYVFLSVGR 396

  Fly   520 VGSTSENITQTILWVYEPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVETKKGADSLEEFLYQCNH 584
            ||||||||||.::.|.:.:|||||||:|.::  .||    .|||||||||:.||:|.::|...|.
pombe   397 VGSTSENITQKVVHVEDSEKRSYLLDILHTL--PPE----GLTLIFVETKRMADTLTDYLLNSNF 455

  Fly   585 PVTSIHGDRTQKEREEALRCFRSGDCPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGR 649
            |.|||||||||:|||.||..||||...|:||||||:||||||:|.||||:|||:|:::|||||||
pombe   456 PATSIHGDRTQRERERALELFRSGRTSIMVATAVASRGLDIPNVTHVINYDLPTDIDDYVHRIGR 520

  Fly   650 TGRMGNLGVATSFFNEKNRNICSDLLELLIETKQEIPSFMEDMSSDRGHGGAKRAGR--GGGGRY 712
            |||.||.|.|.:|||..|:.|..:|:|||.|..||.|||:..|:.:...||..|.||  |.|||.
pombe   521 TGRAGNTGQAVAFFNRNNKGIAKELIELLQEANQECPSFLIAMARESSFGGNGRGGRYSGRGGRG 585

  Fly   713 GGGFGSRDYRQSSGGGGGGRSGPPPRSGGSGSGGGGGSYRS--NGNSYGKFGGNSGGGGYYGGGA 775
            |..:|:||:|:.:....|..|||      |.||.||...|:  :||:|     |||         
pombe   586 GNAYGARDFRRPTNSSSGYSSGP------SYSGYGGFESRTPHHGNTY-----NSG--------- 630

  Fly   776 GGGSYGGSYGGGSASHSSNAPDWW 799
                              :|..||
pombe   631 ------------------SAQSWW 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
belNP_001262379.1 DEADc_DDX3 275..522 CDD:350809 144/249 (58%)
SF2_C_DEAD 527..663 CDD:350174 83/135 (61%)
sum3NP_588033.1 SrmB 171..550 CDD:440279 231/384 (60%)

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