DRSC/TRiP Functional Genomics Resources

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Protein Alignment bel and ddx-23

DIOPT Version :10

Sequence 1:NP_001262379.1 Gene:bel / 45826 FlyBaseID:FBgn0263231 Length:801 Species:Drosophila melanogaster
Sequence 2:NP_498260.2 Gene:ddx-23 / 175818 WormBaseID:WBGene00017162 Length:730 Species:Caenorhabditis elegans


Alignment Length:694 Identity:196/694 - (28%)
Similarity:294/694 - (42%) Gaps:159/694 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 QGFDSRSGNPRQETRDPQQSRGGGGEYRRGGGGGGRGFNRQSGDYGYGSGGGGRRGGGGRFEDNY 138
            :|.|  .||.|...|:.::.|....:.|...|...|....:|.|     ..||||....|..|..
 Worm    75 RGLD--RGNDRDRDRERERDRDRRRDRRERSGSRDRRRRSRSRD-----RDGGRRRDRSRSRDRR 132

  Fly   139 NGGEFDSRRGGDWNRSGGGGGGGRGFGRGPSYRGGGGGSGSNLNEQTAEDGQAQQQQQPRNDRWQ 203
            :       |..|..|                          :.||.:..:....:......||:.
 Worm   133 D-------RNDDRKR--------------------------DRNEDSDNEEDVSKMADAVKDRYL 164

  Fly   204 EPERPAGFDGSEGGQSAGGNRSYNNRGERGGGGYNSRWKEGGGSNVDYTKLGARDERLEVELFG- 267
                     |.:..:...|.|.:..:       :...|..|..::.||.||  ...|.|::.|| 
 Worm   165 ---------GKQKEKKKRGRRLHEKK-------FVFDWDAGEDTSQDYNKL--YQSRHEIQFFGR 211

  Fly   268 --VGNTGINFDK----------------------------------------------------- 277
              |..|.:|..|                                                     
 Worm   212 GSVAGTDVNAQKKEKNSFYQEMMENRRTVDEKEQEMHRLEKELKKEKKVAHDDRHWRMKELSEMS 276

  Fly   278 -------YEDIPVEATGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDL 335
                   .||..:...|..||..:.::::....:.:...|....|.:|||:|:.||||.:..||:
 Worm   277 DRDWRIFREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDV 341

  Fly   336 MACAQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIFEEAKK 400
            :..|:||||||||||:|:|..:..|     |:..|| ..|...|..:::|||||||.||.||..|
 Worm   342 IGVAETGSGKTAAFLLPLLVWITSL-----PKMERQ-EHRDLGPYAIIMAPTRELAQQIEEETNK 400

  Fly   401 FAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRML 465
            |.....::...:.||.:..:|..:|..|..:::||||||.|::....:.|....:::||||||||
 Worm   401 FGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDEADRML 465

  Fly   466 DMGFEPQIRRIVEQLNMPPTGQ-----------------------RQTLMFSATFPKQIQELASD 507
            ||||||.:::::|.  ||.|..                       |||:||:||....|:.||..
 Worm   466 DMGFEPDVQKVLEY--MPDTNMKKDTDEFDNEEALMKGFSTREKYRQTVMFTATMSSAIERLARQ 528

  Fly   508 FLSNYIFLAVGRVGSTSENITQTILWVYEPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVETKKGA 572
            :|.....:.:|..|..:|.:.|.:..|.|..||..|:::|.|....|       .:|||..||||
 Worm   529 YLRRPAVVHIGSAGKPTERVEQVVYMVPEDRKRKKLVEVLESQFQPP-------IIIFVNQKKGA 586

  Fly   573 DSLEEFLYQCNHPVTSIHGDRTQKEREEALRCFRSGDCPILVATAVAARGLDIPHVKHVINFDLP 637
            |.|.:.|.:.....|.:||.:.|.:||.||:..:.|...|||||.||.||:|:..|..|:|:|:.
 Worm   587 DMLSKGLTKLGFKPTVLHGGKGQDQREYALQALKEGTSDILVATDVAGRGIDVKDVSLVLNYDMA 651

  Fly   638 SDVEEYVHRIGRTGRMGNLGVATSFFNEKNRNICSDLLELLIET 681
            ..:|:|.||||||||.|..|.|.:|....:..:..||.::|:|:
 Worm   652 KSIEDYTHRIGRTGRAGKHGKAITFLTPDDTAVYFDLKQVLVES 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
belNP_001262379.1 DEADc_DDX3 275..522 CDD:350809 93/329 (28%)
SF2_C_DEAD 527..663 CDD:350174 55/135 (41%)
ddx-23NP_498260.2 SrmB 304..681 CDD:440279 145/391 (37%)

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