DRSC/TRiP Functional Genomics Resources

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Protein Alignment bel and glh-1

DIOPT Version :10

Sequence 1:NP_001262379.1 Gene:bel / 45826 FlyBaseID:FBgn0263231 Length:801 Species:Drosophila melanogaster
Sequence 2:NP_491963.1 Gene:glh-1 / 172414 WormBaseID:WBGene00001598 Length:763 Species:Caenorhabditis elegans


Alignment Length:809 Identity:272/809 - (33%)
Similarity:389/809 - (48%) Gaps:170/809 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LNGGSADYSGPITSKTSTNSVTGGVYVPPHLRGGGGNNNAADAESQGQGQGQGQGFDSRSGNPRQ 85
            ::.|.:|......:||...|  ||.:       |||||..:   ..|.|:..|.||.  .||.  
 Worm     1 MSDGWSDSESAAKAKTGFGS--GGGF-------GGGNNGGS---GFGGGKNGGTGFG--GGNT-- 49

  Fly    86 ETRDPQQSRGGGGEYRRGGGGGGRGF-NRQSGDYGYGSG-------GGGRRG-----------GG 131
                       ||....||..||.|| ..::|..|:|.|       |||..|           ||
 Worm    50 -----------GGSGFGGGNTGGSGFGGGKTGGSGFGGGNTCGSGFGGGSTGGSPYGGASSGFGG 103

  Fly   132 GRFEDNYNGGEFDSRRGGDWNRSGGGGGGGRGFGRGPSYRGGG---------GGSGSNLN----- 182
            ......:..||..|..||    |||.||...|||.|....|||         ||...|.|     
 Worm   104 STATSGFGSGEKSSAFGG----SGGFGGSATGFGSGGGSFGGGNSGFGEGGHGGGERNNNCFNCQ 164

  Fly   183 ---EQTAEDGQAQQQQQPR----------------NDRWQEPERPAGFDGSEGGQSAGGNRSYNN 228
               .::::..:.:::::||                .:|.....|..||.|..|..:.|||..:..
 Worm   165 QPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGG 229

  Fly   229 RGERGGG----------------------------------GYNS----------RWKEGGGSNV 249
            .|..|||                                  |:.|          ...||.|...
 Worm   230 DGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNECPNPAKPREGVEGEGPKA 294

  Fly   250 DYTKLGARDERLEVELFGVG--NTGINFDKYEDIPVEATGQNVPPNI---TSFDDVQLTEIIRNN 309
            .|..:   ::.:| ::|.:.  :.|:.|:|:.|..|:.|.......|   .:|.:..|||.::.|
 Worm   295 TYVPV---EDNME-DVFNMQKISEGLMFNKFFDAEVKLTSSEKTVGIKPCKTFAEANLTETMQKN 355

  Fly   310 VALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSR 374
            ||.|.|.|.||:|::|:|::..|.|:|||||||||||||||:||:.::.:      ..:......
 Worm   356 VAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLID------DNNLNTAGE 414

  Fly   375 RKQYPLGLVLAPTRELATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRL 439
            ...||..::|.||||||.||:.|.:||||::.|....:|||........::::|..:||.|.||:
 Worm   415 GGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRI 479

  Fly   440 EDMITRGKVGLENIRFLVLDEADRMLD-MGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQE 503
            :.....|.:.|:..||.||||||||:| |||...|..||...:||....|||||||||||..:||
 Worm   480 KHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSATFPDSVQE 544

  Fly   504 LASDFL-SNYIFLAVGRVGSTSENITQTILWVYEPDKRSYLLDLL-------SSIRDGPEYTKDS 560
            .|..|| .||:.:|:.::|:.::.:.|........:|:..||:||       ::.:....|||. 
 Worm   545 AARAFLRENYVMIAIDKIGAANKCVLQEFERCERSEKKDKLLELLGIDIDSYTTEKSAEVYTKK- 608

  Fly   561 LTLIFVETKKGADSLEEFLYQCNHPVTSIHGDRTQKEREEALRCFRSGDCPILVATAVAARGLDI 625
             |::||..:..||:|...|.....|..:|||.|.|:||.||||.||:|..|:|:|||||.|||||
 Worm   609 -TMVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDI 672

  Fly   626 PHVKHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNEKNRNICSDLLELLIETKQEIPSFME 690
            ..|.||||:|:|.::::|:||||||||:||.|.||||.:| :.::.|:|:.:|.:.:|.:|.:|:
 Worm   673 KGVDHVINYDMPDNIDDYIHRIGRTGRVGNSGRATSFISE-DCSLLSELVGVLADAQQIVPDWMQ 736

  Fly   691 DMSSDRGHGGAKRAGRGGGGRYG-GGFGS 718
                     ||      .||.|| .||||
 Worm   737 ---------GA------AGGNYGASGFGS 750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
belNP_001262379.1 DEADc_DDX3 275..522 CDD:350809 106/251 (42%)
SF2_C_DEAD 527..663 CDD:350174 65/142 (46%)
glh-1NP_491963.1 PTZ00368 <160..278 CDD:173561 17/117 (15%)
SrmB 342..713 CDD:440279 168/379 (44%)

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