DRSC/TRiP Functional Genomics Resources

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Protein Alignment bel and ddx41

DIOPT Version :10

Sequence 1:NP_001262379.1 Gene:bel / 45826 FlyBaseID:FBgn0263231 Length:801 Species:Drosophila melanogaster
Sequence 2:XP_012815277.1 Gene:ddx41 / 100491281 XenbaseID:XB-GENE-967537 Length:621 Species:Xenopus tropicalis


Alignment Length:460 Identity:174/460 - (37%)
Similarity:251/460 - (54%) Gaps:51/460 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   277 KYEDIPVEATGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQT 341
            ||. |.||  |:.:|..|.||.:::....|...:.......|||:|...||.|::|||::..|.|
 Frog   165 KYH-ILVE--GERIPQPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFT 226

  Fly   342 GSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIFEEAKKFAYR-- 404
            |||||..|.:|::....|       |..|....:::.|.||::.|:||||.|.....:.:.:.  
 Frog   227 GSGKTLVFTLPVIMFCLE-------QEKRLPFAKREGPYGLIICPSRELARQTHSIIEYYCHLLQ 284

  Fly   405 ----SRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRML 465
                ..:|.|:..||.:..|||..:.:|.|::|||||||.|::.:..|.|:..|:|.|||||||:
 Frog   285 EDNFPHLRTALCIGGMSVKEQMETIKQGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 349

  Fly   466 DMGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFLSNYIFLAVGRVGSTSENITQT 530
            |||||..||.|.....    ||||||:||||.||:||..|...|...|.:.|||.|:.|.::.|.
 Frog   350 DMGFEEDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASLDVIQE 410

  Fly   531 ILWVYEPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVETKKGADSLEEFLYQCNHPVTSIHGDRTQ 595
            :.:|.|..|..|||:.|.  :..|.      .|||.|.|...|::.|:|........:|||.:.|
 Frog   411 VEYVKEEAKMVYLLECLQ--KTPPP------VLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQ 467

  Fly   596 KEREEALRCFRSGDCPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNLGVAT 660
            :||.:|:..||.....:||||.||::|||.|.::||:|:|:|.::|.||||||||||.||.|:||
 Frog   468 EERTKAIEAFREEKKDVLVATDVASKGLDFPAIQHVVNYDMPEEIENYVHRIGRTGRSGNTGIAT 532

  Fly   661 SFFNEK-NRNICSDLLELLIETKQEIPSFME----------DMSSDRGHGGAKRAGRGGGGRYGG 714
            :|.|:. :.::..||..||:|.||.:|..::          |:..:||..            :.|
 Frog   533 TFINKSCDESVLMDLKALLMEAKQRVPPVLQVLNGSDETMLDIGDERGCA------------FCG 585

  Fly   715 GFGSR 719
            |.|.|
 Frog   586 GLGHR 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
belNP_001262379.1 DEADc_DDX3 275..522 CDD:350809 98/250 (39%)
SF2_C_DEAD 527..663 CDD:350174 57/135 (42%)
ddx41XP_012815277.1 DEADc_DDX41 191..396 CDD:350709 85/215 (40%)
SF2_C_DEAD 407..535 CDD:350174 57/135 (42%)

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