DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Abl and AT1G67890

DIOPT Version :10

Sequence 1:NP_001261962.1 Gene:Abl / 45821 FlyBaseID:FBgn0000017 Length:1723 Species:Drosophila melanogaster
Sequence 2:NP_564913.1 Gene:AT1G67890 / 843117 AraportID:AT1G67890 Length:765 Species:Arabidopsis thaliana


Alignment Length:688 Identity:158/688 - (22%)
Similarity:271/688 - (39%) Gaps:159/688 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SGGGGSGA-PV-SCIGLSSSPVASVSPH-----------CISSSSGVSSAPLGGGSTLRGSRIKS 64
            ||...:|. || :.:|...|.|.::||.           ||::.|.:...|          |:..
plant   168 SGESWTGEFPVKNKMGERFSVVTTISPFYDDDGLLIGIICITNDSALFQRP----------RVPP 222

  Fly    65 SSSGVASGSGSGGGGGGSGSGLSQRSGGHKDARCNPTVGLNIFTEHNGTKHSSFRGHPGKYHMNL 129
            :.:....|..|...|   .:|::.|.|..........:||:                   ....:
plant   223 AKNRWQEGDSSFCRG---TNGVASRLGFDSKEAVVSKLGLD-------------------SQQPI 265

  Fly   130 EALLQSRPLPHIPAGSTAASLLADAAELQQHQQDSGGLGLQGSSLGGGHSSTTSVFESAHRWTSK 194
            :|.:.|:.       |..||.:.:....:....|:.....:|.: ||.|.|....|::|.     
plant   266 QAAIASKI-------SDLASKVGNKVRSKMRAGDNNASHPEGGN-GGSHQSDQGFFDAAF----- 317

  Fly   195 ENLLAPGPEEDDPQLFVALYDFQAGGENQLSLKKGEQVR------ILSYNKSGEWCEAHSDSGNV 253
                  ..:.:|.:            .|..|..:|..::      :.:.:||.......|:..| 
plant   318 ------SDQREDAE------------TNDASTPRGNLIQSPFGVFLCNDDKSSSKASGESNDEN- 363

  Fly   254 GWVPSNYVTPLNSLEKHSWYHGPISRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYH 318
               ..|.|.|..           ::....|:::..|::..:...|.|      .:..|....|:.
plant   364 ---DRNSVVPKK-----------LTSKTEEWMVKKGLSWPWKGNERE------GLERRNAHSVWP 408

  Fly   319 YRISEDPDGKVFVTQEAKFNTLAELVHHHSVPH---EGHGLITPLLYPAPKQNKPTV-------- 372
            :..:|..      .:||          |||..:   :...|.:....||..:|..:|        
plant   409 WVHNEQQ------KEEA----------HHSNSYNSVKSESLASESNKPANNENMGSVNVNSASSA 457

  Fly   373 -------------FPLSPEPDEWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNTVAVKTLKEDT 424
                         ..:..:..::||...|:.:..::|.|..|.||..:|  :|:.||||...:..
plant   458 SSCGSTSSSVMNKVDMDSDCLDYEILWEDLTIGEQIGQGSCGTVYHGLW--FGSDVAVKVFSKQE 520

  Fly   425 MA---LKDFLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVA 486
            .:   :..|.:|.::||.::|||::..:|.........|:|||:..|:|...|: ..:..||...
plant   521 YSEEIITSFKQEVSLMKRLRHPNVLLFMGAVASPQRLCIVTEFLPRGSLFRLLQ-RNKSKLDLRR 584

  Fly   487 LLYMATQIASGMSYLE--SRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFP 549
            .::||:.||.||:||.  |...|||||.:.|.||..|..||||||||:|: :.:||....|...|
plant   585 RIHMASDIARGMNYLHHCSPPIIHRDLKSSNLLVDRNWTVKVADFGLSRI-KHETYLTTNGRGTP 648

  Fly   550 IKWTAPEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPAIDLTDVYHKLDKGY---RMERPPGC 611
             :|.|||.|.......||||::|||:|||:.|..: |:..::...|...:  |:   |:|.|...
plant   649 -QWMAPEVLRNEAADEKSDVYSFGVVLWELVTEKI-PWENLNAMQVIGAV--GFMNQRLEVPKDV 709

  Fly   612 PPEVYDLMRQCWQWDATDRPTFKSIHHALEHMFQESSI 649
            .|:...||..||..:...||:|:.:...|..:.::.:|
plant   710 DPQWIALMESCWHSEPQCRPSFQELMDKLRELQRKYTI 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AblNP_001261962.1 SH3_Abl 209..263 CDD:212784 9/59 (15%)
SH2_ABL 268..363 CDD:198189 13/97 (13%)
PTKc_Abl 382..644 CDD:270645 93/269 (35%)
FABD 1584..1723 CDD:197885
AT1G67890NP_564913.1 PAS 102..>211 CDD:441804 12/42 (29%)
STKc_MAP3K-like 493..738 CDD:270901 89/252 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.