Protein Alignment Pdp1 and vri

DIOPT Version :10

• Sequence 1: NP_729301.1
• Gene: Pdp1 / 45588
• FlyBaseID: FBgn0016694
• Length: 647
• Species: Drosophila melanogaster
• Sequence 2: NP_477191.1
• Gene: vri / 33759
• FlyBaseID: FBgn0016076
• Length: 729
• Species: Drosophila melanogaster
• Alignment Length: 333
• Identity: 83/333 - (24%)
• Similarity: 126/333 - (37%)
• Gaps: 96/333 - (28%)

  Fly   341 QNNNNNNGNNSGNSNNNSNNNVSSVQHVANAVAAAVIANEHHNHLNSLKARF-------QPASSG 398
            :||.:.|..|:...:|.|||....:|..:|        |.|..|...|:.:.       |...||
  Fly    27 KNNTDTNYINNYKQDNPSNNKFPRIQAQSN--------NSHLQHQQQLQQKLAQLHHYSQQKLSG 83

  Fly   399 RKSPFLGFICKSNGKSTSNSKE----IICPDDKYKEEGDIWNVEAQTAFLGPNLWDKTLPYDADL 459
            ...|:       ..:..:..||    ::.|..|...|..:     .||.  |.:...| |.::..
  Fly    84 SDFPY-------GPRPPTGGKEEKLLLLAPPGKLYPEASV-----STAM--PEVLSGT-PTNSHN 133

  Fly   460 KV-------TQYADLDEFLSEN-------NI-PDGLPGTHLGHSSGLGHRSDSLG-HAAGLSLGL 508
            |.       .:.:::...||.|       |: |..:.|..:...|.....||||| :..|...|.
  Fly   134 KANIAMMNNVRLSNISPTLSMNGSSNEASNLHPLSMYGGSISPQSNDSGMSDSLGKYVPGSGYGD 198

  Fly   509 GHITTKRERSPSPSDCISPDTLNPPSPAESTFSFASSGRDFDPRTRAFSDEELKPQPMIKKSRKQ 573
            |.:.    :|||...       |.|..|.:.                 :.:||..|    :.:::
  Fly   199 GMMA----QSPSQGG-------NGPQSALTA-----------------AQKELFSQ----RKQRE 231

  Fly   574 FVPDELKDDKYWARRRKNNIAAKRSRDARRQKENQIAMRARYLEKENATLHQEVEQLKQENMDLR 638
            |.||..||:.||.|||:||.||||||:.||..:              ..|.|.|.:|.:||..|:
  Fly   232 FTPDNKKDESYWDRRRRNNEAAKRSREKRRYND--------------MVLEQRVIELTKENHVLK 282

  Fly   639 ARLSKFQD 646
            |:|...:|
  Fly   283 AQLDAIRD 290

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pdp1	NP_729301.1	NAM-associated	514..609	CDD:464129	29/94 (31%)
		bZIP_HLF	580..639	CDD:269843	24/58 (41%)
		coiled coil	581..639	CDD:269843	23/57 (40%)
vri	NP_477191.1	bZIP_NFIL3	238..297	CDD:269842	27/67 (40%)
		coiled coil	239..297	CDD:269842	26/66 (39%)