DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp1 and Tef

DIOPT Version :10

Sequence 1:NP_729301.1 Gene:Pdp1 / 45588 FlyBaseID:FBgn0016694 Length:647 Species:Drosophila melanogaster
Sequence 2:XP_011243859.1 Gene:Tef / 21685 MGIID:98663 Length:340 Species:Mus musculus


Alignment Length:276 Identity:103/276 - (37%)
Similarity:138/276 - (50%) Gaps:61/276 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   429 KEEGDIWNVEAQTAFLGPNLWDKTLPYDADLKVTQYADLDEFLSENNIPDGLPGTHLGH------ 487
            ::|....:..|.:|.|.|.:||||:|||.:....:|.||||||.||.||  ...|||..      
Mouse    61 EDESAAASTMAVSASLMPPIWDKTIPYDGESFHLEYMDLDEFLLENGIP--ASPTHLAQNLLLPV 123

  Fly   488 -------------------SSGLGHRSDSLGHAAG------------------------------ 503
                               |:.:...|:::...|.                              
Mouse   124 AELEGKESASSSTASPPSSSTAIFQPSETVSSTASHMEQEDPGARVSQAKTTFSFSYFPVGFWKA 188

  Fly   504 --LSLGLGHITTKRERSPSPSD--CISPDTLNPPSPAESTFSFASSGRDFDPRTRAFSDEELKPQ 564
              :||.|.....|...:|||.|  |:..|....|.||:...|....|..|:||...|::|:||||
Mouse   189 NCISLTLESSLEKERETPSPIDPSCVEVDVNFNPDPADLVLSSVPGGELFNPRKHRFAEEDLKPQ 253

  Fly   565 PMIKKSRKQFVPDELKDDKYWARRRKNNIAAKRSRDARRQKENQIAMRARYLEKENATLHQEVEQ 629
            |||||::|.|||||.||:|||.||:|||:||||||||||.|||||.:||.:|||||..|..||.:
Mouse   254 PMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAE 318

  Fly   630 LKQENMDLRARLSKFQ 645
            |::|....:..:||::
Mouse   319 LRKEVGKCKTIVSKYE 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdp1NP_729301.1 NAM-associated 514..609 CDD:464129 55/96 (57%)
bZIP_HLF 580..639 CDD:269843 37/58 (64%)
coiled coil 581..639 CDD:269843 36/57 (63%)
TefXP_011243859.1 bZIP_HLF 269..327 CDD:269843 37/57 (65%)
coiled coil 270..327 CDD:269843 36/56 (64%)

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