DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp1 and zip-7

DIOPT Version :10

Sequence 1:NP_729301.1 Gene:Pdp1 / 45588 FlyBaseID:FBgn0016694 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_502961.1 Gene:zip-7 / 178459 WormBaseID:WBGene00013100 Length:185 Species:Caenorhabditis elegans


Alignment Length:116 Identity:37/116 - (31%)
Similarity:66/116 - (56%) Gaps:11/116 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   526 SPDTLNPPSPAESTFSFASSGRDFDPRTRAFSDEELKPQPMIKKSRKQFVPDELKDDKYWARRRK 590
            :|...:..||:.|:.|..:|.:  :.::.:...::.||.|         ||:..||:.|..|||:
 Worm    59 NPHATSSFSPSSSSTSSTTSSQ--NQQSGSSGSKKKKPVP---------VPENQKDEAYLDRRRR 112

  Fly   591 NNIAAKRSRDARRQKENQIAMRARYLEKENATLHQEVEQLKQENMDLRARL 641
            ||.||::||::|::.:...::|..|||:||..|...|:||:.:|..:|..|
 Worm   113 NNEAARKSRESRKKVDQDNSVRVTYLERENQCLRVYVQQLQLQNESMRQHL 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdp1NP_729301.1 NAM-associated 514..609 CDD:464129 24/82 (29%)
bZIP_HLF 580..639 CDD:269843 24/58 (41%)
coiled coil 581..639 CDD:269843 23/57 (40%)
zip-7NP_502961.1 bZIP 102..161 CDD:473870 24/58 (41%)
coiled coil 106..157 CDD:269834 21/50 (42%)

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