DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pdp1 and cebpg

DIOPT Version :10

Sequence 1:NP_729301.1 Gene:Pdp1 / 45588 FlyBaseID:FBgn0016694 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_571961.1 Gene:cebpg / 140816 ZFINID:ZDB-GENE-020111-5 Length:163 Species:Danio rerio


Alignment Length:83 Identity:25/83 - (30%)
Similarity:40/83 - (48%) Gaps:14/83 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   572 KQFVPDELK-------DDKYWARRRKNNIAAKRSRDARRQKENQIAMRARYLEKENATLHQEVEQ 629
            |...|.::|       .|:|..||.:||:|.|:||...:||......|...|::||..|..:::.
Zfish    53 KATAPSKMKKSNMDKDSDEYRQRRERNNLAVKKSRMRSKQKAQDTQQRVNELKEENERLEAKIKL 117

  Fly   630 LKQENMDLRARLSKFQDV 647
            |.:|       ||..:|:
Zfish   118 LSKE-------LSVLKDL 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdp1NP_729301.1 NAM-associated 514..609 CDD:464129 15/43 (35%)
bZIP_HLF 580..639 CDD:269843 20/65 (31%)
coiled coil 581..639 CDD:269843 19/57 (33%)
cebpgNP_571961.1 bZIP_CEBPG 67..127 CDD:269861 21/66 (32%)
coiled coil 69..127 CDD:269861 21/64 (33%)

Return to query results.
Submit another query.