DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp1 and LOC1278160

DIOPT Version :10

Sequence 1:NP_729301.1 Gene:Pdp1 / 45588 FlyBaseID:FBgn0016694 Length:647 Species:Drosophila melanogaster
Sequence 2:XP_061512533.1 Gene:LOC1278160 / 1278160 VectorBaseID:AGAMI1_011445 Length:876 Species:Anopheles gambiae


Alignment Length:591 Identity:144/591 - (24%)
Similarity:190/591 - (32%) Gaps:202/591 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 AAAGNSGGNSSSSNNNNSSGNNSSSGNSDSGNDGSMTGSSGTMDNHRSSV-----SSNDSGKSSA 94
            ||||             ||...||.|.....|.|....|......||:|.     .:::.||.|:
Mosquito   341 AAAG-------------SSPTVSSGGAIQHTNGGPAYLSPVHAIYHRNSTIIEYERASEGGKLSS 392

  Fly    95 TGGGGAGATSNNGVNAWALQQQQQTAALHHQQQQQHQQQQQHQQHLQQHHQAHHQHVLQQQQQQQ 159
            ..|      |:...:...|:..::....||..|||..||||.||..||..|.|||..|....|..
Mosquito   393 AEG------SSRSPSQIRLELIERNLDDHHHLQQQLAQQQQQQQQQQQQQQHHHQQQLASSSQHP 451

  Fly   160 QQHSQHQHQQ-------QHHGHPLHPHHTHQQQQQQQQQQQPPPQHHQQQQQQHAQQQQQQHHAA 217
            ..|..|..::       .|| ||.||||....|.|.|.|..|..||.||||||..||||||.|..
Mosquito   452 LHHYSHHPREAMRESVIDHH-HPHHPHHPQHHQHQPQHQPHPHQQHLQQQQQQQQQQQQQQQHPH 515

  Fly   218 QLAHTL-------------SSAAVAAAAGNTGGNTNPHSIFGTGNFHYKTN---NSWTLPTLT-- 264
            .|...:             .|....:||...|..|.      |.|....::   :|.|.||:.  
Mosquito   516 HLHQRVLVSNGDLDRDDRSPSPLTPSAAPRFGSPTT------TTNSSSSSSAPISSTTPPTIISS 574

  Fly   265 --------------------YQRIYQENPHYQRNSFMDPQSNAAAAAAAAAASCNAAA----VAA 305
                                |.:.:..:||:.....:.|......|::..|:|...|:    .||
Mosquito   575 TSPAGSPPAHVPVAHAHSHHYSQHHHHHPHHLAAHHVHPPHFVVGASSPYASSALPASGYPLTAA 639

  Fly   306 AAAVASGNQGSNGNASGNGNAVVAATGNGNGGNPGQNNNNNNGNNSGNSNNNSNN-----NVSSV 365
            |||||         |..||.:.:.       |:|.:.....:...:.|..|.|..     :.|..
Mosquito   640 AAAVA---------AYANGASALY-------GSPPRTTEIASALLTANVLNLSRRAPSPYDASPA 688

  Fly   366 QHVANAVAAAVIA---------NEHHNHLNSLKARFQPASSGRKSPFLGFICKSNGKSTSNSKEI 421
            |..::..:|...:         .|.|.|.|||..:.      |....||                
Mosquito   689 QTASSTASAGSTSGGEEEPDREREIHEHANSLPVKL------RHKSHLG---------------- 731

  Fly   422 ICPDDKYKEEGDIWNVEAQTAFLGPNLWDKTLPYDADLKVTQYADLDEFLSENNIPDGLPGTHLG 486
                ||          :|.||                           .|:..||          
Mosquito   732 ----DK----------DAATA---------------------------LLALQNI---------- 745

  Fly   487 HSSGLGHRSDSLGHAAG--------LSLGLGHITTKRERS---PSPSDCISPDTLNPPSPAESTF 540
            ....:||||.|.....|        ..:......||.|:.   |.|.        :|||.|.|:.
Mosquito   746 KQEPIGHRSSSPAWDDGDGSSDERDSGISTNEWPTKAEQKMMVPLPG--------SPPSAASSSS 802

  Fly   541 SFASSG 546
            |..|.|
Mosquito   803 SATSGG 808

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdp1NP_729301.1 NAM-associated 514..609 CDD:464129 12/36 (33%)
bZIP_HLF 580..639 CDD:269843
coiled coil 581..639 CDD:269843
LOC1278160XP_061512533.1 None
Blue background indicates that the domain is not in the aligned region.

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