DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pdp1 and Nfilz

DIOPT Version :10

Sequence 1:NP_729301.1 Gene:Pdp1 / 45588 FlyBaseID:FBgn0016694 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_001388168.1 Gene:Nfilz / 100042953 MGIID:3782301 Length:278 Species:Mus musculus


Alignment Length:63 Identity:30/63 - (47%)
Similarity:42/63 - (66%) Gaps:0/63 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   569 KSRKQFVPDELKDDKYWARRRKNNIAAKRSRDARRQKENQIAMRARYLEKENATLHQEVEQLK 631
            :.:::|:|:|.||..||.:|||||.||||||:.||..:..|..|...|.:|||.|..|::.||
Mouse    29 RRQREFMPEEKKDTVYWEKRRKNNEAAKRSREKRRLNDVAIEGRLAMLLEENAILRAELQALK 91

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdp1NP_729301.1 NAM-associated 514..609 CDD:464129 20/39 (51%)
bZIP_HLF 580..639 CDD:269843 27/52 (52%)
coiled coil 581..639 CDD:269843 26/51 (51%)
NfilzNP_001388168.1 bZIP_NFIL3 40..97 CDD:269842 27/52 (52%)
coiled coil 41..97 CDD:269842 26/51 (51%)

Return to query results.
Submit another query.