DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp1 and si:dkey-172o19.2

DIOPT Version :10

Sequence 1:NP_729301.1 Gene:Pdp1 / 45588 FlyBaseID:FBgn0016694 Length:647 Species:Drosophila melanogaster
Sequence 2:XP_005170589.2 Gene:si:dkey-172o19.2 / 100000812 ZFINID:ZDB-GENE-070424-213 Length:329 Species:Danio rerio


Alignment Length:126 Identity:43/126 - (34%)
Similarity:60/126 - (47%) Gaps:16/126 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   517 RSPSPSDCISPDTLNPPSPAESTFSFASSG--RDFDPRT-------RAFSDEELKPQPMI--KKS 570
            |||.|    ..|...|.|..|.:.|....|  |...|.|       |.|..:..: .|:|  ::.
Zfish     5 RSPEP----LADACLPSSTGEISASKDEPGNLRRRLPLTGSSTLARRLFHFQSYR-NPLITSRRR 64

  Fly   571 RKQFVPDELKDDKYWARRRKNNIAAKRSRDARRQKENQIAMRARYLEKENATLHQEVEQLK 631
            :::..|.|.||..||.:|:|||.||||||:.||..:..:..:...|.:|||.|..||..|:
Zfish    65 KREMTPSEKKDASYWVKRKKNNEAAKRSREKRRLNDFMLEGQLLALSEENAQLRAEVLSLQ 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdp1NP_729301.1 NAM-associated 514..609 CDD:464129 35/102 (34%)
bZIP_HLF 580..639 CDD:269843 24/52 (46%)
coiled coil 581..639 CDD:269843 23/51 (45%)
si:dkey-172o19.2XP_005170589.2 None

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