DRSC/TRiP Functional Genomics Resources

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Protein Alignment TrpRS and Wars1

DIOPT Version :10

Sequence 1:NP_524826.1 Gene:TrpRS / 45399 FlyBaseID:FBgn0010803 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_001013188.2 Gene:Wars1 / 314442 RGDID:1308278 Length:475 Species:Rattus norvegicus


Alignment Length:412 Identity:258/412 - (62%)
Similarity:318/412 - (77%) Gaps:16/412 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 NGKPDAEPVETGTDAQAQEGATAPTEDVVDPWNVASSNDAGVDYDKLIKRFGSSKIDEELIARFE 82
            ||.||               ||..:||.||||.|.:|:..|:||||||.:|||||||:|||.|.|
  Rat    76 NGDPD---------------ATKASEDFVDPWTVRTSSAKGIDYDKLIVQFGSSKIDKELINRIE 125

  Fly    83 KITGKPAHHFIRRGMFFSHRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQET 147
            :.||:..|.|:|||:||||||::.||...|..|||||||||||||.::|:|||||||.|||||:.
  Rat   126 RATGQRPHRFLRRGIFFSHRDMNQILDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQDV 190

  Fly   148 FDVPLVIQLTDDEKTLWKDLKVEDAIKLGRENAKDIVAIGFDVNKTFIFNNLEFVGKCPAMYQNI 212
            ||||||||::||||.|||||.:|.|.....||||||:|.||||||||||::||::|:.|..|:|:
  Rat   191 FDVPLVIQMSDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDVNKTFIFSDLEYMGQSPGFYKNV 255

  Fly   213 IRIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPAISSTFPFIFGNR-KVHCLIPCAIDQDPY 276
            ::|||.||||||||||||.|||.||||.|||.||||:.|::||.||.:| .:.||||||||||||
  Rat   256 VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAVQAAPSFSNSFPKIFRDRTDIQCLIPCAIDQDPY 320

  Fly   277 FRMTRDVAPRLGFPKCALIHSTFFPALQGAKTKMSASDQNSAVYLTDTPKQIKNKINKYAFSGGR 341
            ||||||||||:|.||.||:|||||||||||:|||||||.||:::||||.||||:|:||:|||||.
  Rat   321 FRMTRDVAPRIGHPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTDTAKQIKSKVNKHAFSGGS 385

  Fly   342 VSVEEHRKLGGVPEVDVSYQLLKFFLEDDAKLEEVRVAYSKGEMLTGEIKKLAVETLTPIVEQHQ 406
            .:|||||:.||..|||||:..|.||||||..||::|..|:.|.|||||:||..::.|.|::.:||
  Rat   386 DTVEEHRQFGGNCEVDVSFMYLTFFLEDDDSLEQIRKDYTSGAMLTGELKKTLIDVLQPLIAEHQ 450

  Fly   407 AARKLITDEVLDKYFELRPLKF 428
            |.||.:|:|.:.::...|.|.|
  Rat   451 ARRKAVTEETVKEFMAPRQLSF 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrpRSNP_524826.1 PLN02486 45..426 CDD:178104 248/381 (65%)
Wars1NP_001013188.2 WEPRS_RNA 16..65 CDD:238473
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 65..85 6/23 (26%)
PLN02486 89..470 CDD:178104 248/380 (65%)
'HIGH' region 168..177 4/8 (50%)
'KMSKS' region 353..357 3/3 (100%)
Blue background indicates that the domain is not in the aligned region.

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