DRSC/TRiP Functional Genomics Resources

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Protein Alignment shu and fkbp15a

DIOPT Version :10

Sequence 1:NP_611837.1 Gene:shu / 45360 FlyBaseID:FBgn0003401 Length:455 Species:Drosophila melanogaster
Sequence 2:XP_021329704.1 Gene:fkbp15a / 799923 ZFINID:ZDB-GENE-060526-98 Length:875 Species:Danio rerio


Alignment Length:517 Identity:103/517 - (19%)
Similarity:185/517 - (35%) Gaps:157/517 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 DSDSDSDYEDALDVDGEELRSPWTYSFDELRALMSEIDENIYKRITRTGHVDREAVPNKARVSVR 109
            |..||:..|..||       :|.|   |:.:....::|:....::........::.|:||::..|
Zfish   308 DICSDTLSEGKLD-------TPET---DKSKCAQHDLDQAPDGKVEPKSECQIDSGPSKAKLISR 362

  Fly   110 YS-----------GYWEGETAPFDSSLLRGSKFVFETG--------------------------- 136
            .:           |....:..|.||.....|    |:|                           
Zfish   363 IAKMGQPMLPFLIGAIPAQPDPSDSETEDAS----ESGLTCDPCPSHDSPSPKPAQIPCTSPPSL 423

  Fly   137 -QGTVVEGLEVAVRS-MRPYEQAEFIISYKLLFGELGC------PPRIKPKADALFKVEVIDYS- 192
             |...|:..|.|.:: ..|.:.          |....|      ||::. ...::::.:.|.|| 
Zfish   424 YQADAVQNKEAAPQAESNPAQD----------FQPCSCRENPYFPPQLN-SFTSIYQAQHIPYST 477

  Fly   193 ------LIGDAK--------GIDAIPQE-DRDKFCVVYPKAVDLHLHGKDSVKLGRYQSAATAFE 242
                  |:.||:        .|:.:... ||     :..|..|||..|..|..|     |..:.|
Zfish   478 PDITSFLMSDARQHNKEILMAIEKLEHRVDR-----LTSKVDDLHKEGHFSFGL-----ATVSLE 532

  Fly   243 RAVSSLNYCRMANDEEERKQTELLTTL--NQNLMIVYNKM------NK------PKRACIMMKAL 293
            ..:...|..|:...|....:.|:|::.  .||     :||      ||      |.:.|.:....
Zfish   533 TNMILYNIQRIIQQESVCLKNEVLSSKLEGQN-----HKMEDLCEQNKRYMEQLPIQTCHIHSEQ 592

  Fly   294 RHLTMGNPSCKALFQ-----------EGRALAALGE--YNLARNAYLQAQAKQPANK-EISDEII 344
            ........||:...|           :.:..|||.:  .:.|:.:.|:||..:...| |.||:..
Zfish   593 EKEDSLISSCQLQQQLVNLQQRETEIQTQLSAALDDKHKHCAQISLLEAQVAELLKKEEQSDQRW 657

  Fly   345 SMNKR--------ISKYEEASRDIWARAFSLKNSKSD-VRKTPAQLEK---EAKEQDFNDKMEDL 397
            ...|:        |...:|..:|:.|...:|:...|: .||..|:.|:   |.:|:....:.|.|
Zfish   658 RAEKQKYKELESTIQNMDEEMQDLRAEKENLQQVLSEKKRKWKAERERIIVEQEEEHERSQQEVL 722

  Fly   398 -----IRRFKNTSD---QQVSFSRKSYSNAQFDATCKLAKEHNLKLTLSPIQ---EDVLTLS 448
                 :|:.:::::   :|..|.    .:||.....:||::..|:..::.:|   ||:.|.|
Zfish   723 QLLMQLRKARHSTEALMKQAEFE----LSAQKKCDAELAEQEKLEGAITELQEQCEDLTTTS 780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shuNP_611837.1 FKBP_C 96..189 CDD:459735 20/138 (14%)
TPR repeat 218..257 CDD:276809 10/38 (26%)
TPR 230..>389 CDD:440225 43/198 (22%)
TPR repeat 262..295 CDD:276809 10/46 (22%)
TPR repeat 304..329 CDD:276809 6/37 (16%)
fkbp15aXP_021329704.1 FkpA 181..288 CDD:440311
SMC_prok_B <616..874 CDD:274008 39/169 (23%)
Blue background indicates that the domain is not in the aligned region.

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