DRSC/TRiP Functional Genomics Resources

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Protein Alignment shu and Fkbp1b

DIOPT Version :10

Sequence 1:NP_611837.1 Gene:shu / 45360 FlyBaseID:FBgn0003401 Length:455 Species:Drosophila melanogaster
Sequence 2:XP_038968726.1 Gene:Fkbp1b / 58950 RGDID:61835 Length:201 Species:Rattus norvegicus


Alignment Length:79 Identity:21/79 - (26%)
Similarity:33/79 - (41%) Gaps:23/79 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 ARVSVRYSGYWEGETAPFDSSLL-RGSKFVFETGQGTVVEGLEV---------AVRSMR------ 152
            ||.|:|.    |.||.|..|.|. |.|..|.:.....:|.|::|         ::.|:|      
  Rat   126 ARNSIRP----ETETNPSSSELASRKSSKVLKKALPRIVLGMQVENCSKRGRRSLHSLRAKGLNW 186

  Fly   153 ---PYEQAEFIISY 163
               .||.:..:::|
  Rat   187 SSFTYEASVLLLNY 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shuNP_611837.1 FKBP_C 96..189 CDD:459735 21/79 (27%)
TPR repeat 218..257 CDD:276809
TPR 230..>389 CDD:440225
TPR repeat 262..295 CDD:276809
TPR repeat 304..329 CDD:276809
Fkbp1bXP_038968726.1 None
Blue background indicates that the domain is not in the aligned region.

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