DRSC/TRiP Functional Genomics Resources

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Protein Alignment shu and LOC4577832

DIOPT Version :10

Sequence 1:NP_611837.1 Gene:shu / 45360 FlyBaseID:FBgn0003401 Length:455 Species:Drosophila melanogaster
Sequence 2:XP_001237981.3 Gene:LOC4577832 / 4577832 VectorBaseID:AGAMI1_001713 Length:437 Species:Anopheles gambiae


Alignment Length:429 Identity:146/429 - (34%)
Similarity:242/429 - (56%) Gaps:17/429 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLKNPLSYSDLVKKGVEFEVDNSQQNHARD-LGLDSDSDSDYEDALDVDGEELRSPWTYSFDELR 75
            :||.|::.|||:..|.||::|....:|..| ..||.|..|..||  |...::|::||..:|||||
Mosquito    10 VLKAPINLSDLLNGGTEFQIDTEFNDHEGDEYFLDDDYGSADED--DERYKQLQTPWERTFDELR 72

  Fly    76 ALMSEIDENIYKRITRTGHVDREAVPNKARVSVRYSGYWEGETAPFDSSLLRGSKFVFETGQGTV 140
            ..|.:|:|::|||:|:.|  ..|.:|:..||.:.|:.::|||:.||||:.||.....|..|:..|
Mosquito    73 QEMDQINEHLYKRVTKAG--VGEPIPDSTRVVIEYNAFFEGESKPFDSTTLRDKPHRFVVGKSNV 135

  Fly   141 VEGLEVAVRSMRPYEQAEFIISYKLLFGELGCPPRIKPKADALFKVEVIDYSLIGDAKGIDAIPQ 205
            :.|||.|||:||..|:|:|:|:|:|::||.||..|:|||||.||.:.:|..:.:.|.:.:..:.:
Mosquito   136 LPGLEQAVRTMRVSEEAQFVIAYQLMYGEFGCLQRVKPKADVLFVIRLISATPVSDGEALAKLNE 200

  Fly   206 EDRDKFCVVYPKAVDLHLHGKDSVKLGRYQSAATAFERAVSSLNYCRMANDEEERKQTELLTTLN 270
            .:|..:..|..|..::..:.:|..:.....:|...:..||.:|..|::.::.|:.:|.:.|..|.
Mosquito   201 TERRTYATVKDKVTEIRQYARDCFQRNLVPNAIVKYLEAVHTLQTCQLKDEAEQAEQQKTLIALY 265

  Fly   271 QNLMIVYNKMNKPKRACIMMKALRHLTMGNPSCKALFQEGRALAALGEYNLARNAYLQAQAKQPA 335
            .:|.:.||:.::||.||.|:..||.|...:.|.|.|:|||:||.:||||:.||...|:||..:|.
Mosquito   266 TSLAVCYNRRDRPKDACRMVNELRRLCDVSKSAKILYQEGKALMSLGEYDRARKCLLRAQQLEPQ 330

  Fly   336 NKEISDEIISMNKRISKYEEASRDIWARAFSLKNSKSDVRKTPAQLEKE--AKEQDFNDKMEDLI 398
            ::.:...:..:|.|..|:::..:.||:|||.|...|          ||:  |::.:..|.|:..|
Mosquito   331 DEIVQQVLKQLNDRSVKHQQEEKKIWSRAFGLAEKK----------EKQLSAEDTELLDNMKQTI 385

  Fly   399 RRFKNTSDQQVSFSRKSYSNAQFDATCKLAKEHNLKLTL 437
            :.|...............::.:.....:||.|.||||.:
Mosquito   386 QLFVEDEGSSTLPLPDGLTDRELALMDQLASELNLKLNV 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shuNP_611837.1 FKBP_C 96..189 CDD:459735 43/92 (47%)
TPR repeat 218..257 CDD:276809 6/38 (16%)
TPR 230..>389 CDD:440225 51/160 (32%)
TPR repeat 262..295 CDD:276809 12/32 (38%)
TPR repeat 304..329 CDD:276809 14/24 (58%)
LOC4577832XP_001237981.3 None

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