DRSC/TRiP Functional Genomics Resources

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Protein Alignment shu and zda

DIOPT Version :10

Sequence 1:NP_611837.1 Gene:shu / 45360 FlyBaseID:FBgn0003401 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_611353.1 Gene:zda / 37144 FlyBaseID:FBgn0034368 Length:397 Species:Drosophila melanogaster


Alignment Length:390 Identity:74/390 - (18%)
Similarity:156/390 - (40%) Gaps:66/390 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 EVDNSQQNHARDLGLDSDSDSDYEDALDVDGEELRS-----PWTYSFDELRALMSEIDE------ 83
            :.:.|..:...||    .:..|.:|...|..||..|     |.:.|.|..:|...:.:|      
  Fly     2 DTEKSSSSSFEDL----TNAEDTKDIRKVAAEEAASGDGAPPASVSGDGQKAEEEDAEEECDILG 62

  Fly    84 --NIYKRITRTGHVDREAVPNKAR-VSVRYSGYWEGETAPFDSSLLRGSKFVFETGQGTVVEGLE 145
              .:.||..:....|....|.:.. |:|.::|..:..|. .::.|    .|....|...|::||:
  Fly    63 NKQLIKRTIKKAPQDSFRRPIRGELVTVNFTGKLDNGTV-VENEL----NFQCHVGDYEVIQGLD 122

  Fly   146 VAVRSMRPYEQAEFIISYKLLFGELGCPPR------IKPKADALFKVEVID--YSLIGDAKGIDA 202
            :.:..::..|.::..:..:..:|.||....      :.|.|...:::|::|  |....|.|..:.
  Fly   123 MVLPMLQVGEVSQVSVDSRFGYGSLGLKKEGESEYLVPPDAHLTYEIELLDIKYEEFADLKSFEI 187

  Fly   203 I-----PQEDRDKFCVVYPKAVDLHLHGKDSVKLGRYQSAATAFERAVSSL-NYCRMANDEEERK 261
            :     .:::|..|                ..|...:.:|...:.||:..| |.....:.|.:::
  Fly   188 LRKYGTRKKERANF----------------FYKRSEFTTAIHLYRRALDFLDNRDGDPDSEFDKE 236

  Fly   262 QTEL----LTTLNQNLMIVYNK--MNKPKRAC--IMMKALRHLTMGNP-SCKALFQEGRALAALG 317
            ..||    ..||.::.:||||.  |.:.|.|.  ..::::.|:....| :.|||:::||.|....
  Fly   237 DLELSNSDTQTLLEDRLIVYNNLAMTQIKIAAYDAALQSVEHVLRCQPNNSKALYRKGRILEGKA 301

  Fly   318 EYNLARNAYLQAQAKQPANKEISDEIISMNKRISKYEEASRDIW----ARAFSLKNSKSDVRKTP 378
            :...|.....:....:|.|:.:..::..:..:..:.|...::::    .:|..::.:.:..:|.|
  Fly   302 DTQGAIKLLQKVATLEPENRAVQSDLARLFIKARREEHNEKEMYQKMLGQAKKMEQNTATRQKQP 366

  Fly   379  378
              Fly   367  366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shuNP_611837.1 FKBP_C 96..189 CDD:459735 19/99 (19%)
TPR repeat 218..257 CDD:276809 6/39 (15%)
TPR 230..>389 CDD:440225 33/163 (20%)
TPR repeat 262..295 CDD:276809 11/40 (28%)
TPR repeat 304..329 CDD:276809 7/24 (29%)
zdaNP_611353.1 FKBP_C 80..172 CDD:459735 18/96 (19%)
Spy 196..>338 CDD:443119 31/157 (20%)
TPR repeat 196..220 CDD:276809 6/39 (15%)
TPR repeat 252..282 CDD:276809 8/29 (28%)
TPR repeat 287..313 CDD:276809 7/25 (28%)
TPR repeat 321..349 CDD:276809 1/27 (4%)

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