DRSC/TRiP Functional Genomics Resources

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Protein Alignment shu and Fkbp3

DIOPT Version :10

Sequence 1:NP_611837.1 Gene:shu / 45360 FlyBaseID:FBgn0003401 Length:455 Species:Drosophila melanogaster
Sequence 2:XP_063117749.1 Gene:Fkbp3 / 299104 RGDID:1304992 Length:233 Species:Rattus norvegicus


Alignment Length:191 Identity:45/191 - (23%)
Similarity:70/191 - (36%) Gaps:50/191 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SYSDLVK----KGVEFEVDNSQQNHARDLGLDSDSDSDYEDALDVDGEELRSPWTYSFDELRALM 78
            :|:.|.:    ||.|.....|:|.....|..|...||..|:.||      ..|..|:        
  Rat    62 AYNHLFESKRFKGTETISKVSEQVKNVKLNDDKQKDSKSEETLD------EGPPKYT-------- 112

  Fly    79 SEIDENIYKRITRTGHVDREAVPNKARVSVRYSGYWEGETAP----FDSSLLRGSK-------FV 132
                    |.:.:.|  |:...|.|..|    ...|...|.|    ||:::...||       ..
  Rat   113 --------KSVLKKG--DKTNFPKKGDV----VHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLS 163

  Fly   133 FETGQGTVVEGLEVAVRSMRPYEQAEFIISYKLLFGELGCPPRIKPKADALFKVEVIDYSL 193
            |:.|.|.|:.|.:.|:.:|...|:|...|..:..:|:.|.|       ||.:....:.::|
  Rat   164 FKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQP-------DAKYPFSFVAHTL 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shuNP_611837.1 FKBP_C 96..189 CDD:459735 26/103 (25%)
TPR repeat 218..257 CDD:276809
TPR 230..>389 CDD:440225
TPR repeat 262..295 CDD:276809
TPR repeat 304..329 CDD:276809
Fkbp3XP_063117749.1 None
Blue background indicates that the domain is not in the aligned region.

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