DRSC/TRiP Functional Genomics Resources

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Protein Alignment shu and Fkbp39

DIOPT Version :10

Sequence 1:NP_611837.1 Gene:shu / 45360 FlyBaseID:FBgn0003401 Length:455 Species:Drosophila melanogaster
Sequence 2:XP_308400.5 Gene:Fkbp39 / 1269751 VectorBaseID:AGAMI1_006772 Length:370 Species:Anopheles gambiae


Alignment Length:213 Identity:50/213 - (23%)
Similarity:79/213 - (37%) Gaps:59/213 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VKKGVEFEVDNSQQNHARDLGLDSDSDSDYEDALDVDGEELRSPWTYSFDELRALMSEIDENIYK 87
            :..|.|.:.|:.......|   |||.|.|.||..:.|.:|       ..||......|.||::.:
Mosquito   166 IVNGAEDDDDDDDDEEDDD---DSDDDEDVEDEEEDDDDE-------DDDEDDHEEDEEDEDVKQ 220

  Fly    88 ------RITRTGHV-----------------------------------------DREAVPNKAR 105
                  ::...|..                                         ..||.|.| :
Mosquito   221 PKAKQAKLANDGKAAVNGNAKAAKEAPKKQEQQQKKGGIRTLQDGLMVEDLKVGNGPEAKPGK-K 284

  Fly   106 VSVRYSGYWEGETAPFDSSLLRGSKFVFETGQGTVVEGLEVAVRSMRPYEQAEFIISYKLLFGEL 170
            ::|.|.|..:.....|||: .:|....|..|:|.||:|.::.|..|:...:...:|.:||.:|..
Mosquito   285 IAVYYEGRLKSNNKVFDST-NKGPGLKFTLGRGEVVKGWDLGVAGMKVGGKRRLVIPHKLAYGTK 348

  Fly   171 GCPPRIKPKADALFKVEV 188
            |.||.|.|.:..:|:||:
Mosquito   349 GSPPVIPPCSTLVFEVEL 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shuNP_611837.1 FKBP_C 96..189 CDD:459735 31/93 (33%)
TPR repeat 218..257 CDD:276809
TPR 230..>389 CDD:440225
TPR repeat 262..295 CDD:276809
TPR repeat 304..329 CDD:276809
Fkbp39XP_308400.5 None
Blue background indicates that the domain is not in the aligned region.

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