DRSC/TRiP Functional Genomics Resources

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Protein Alignment pk and prickle1b

DIOPT Version :10

Sequence 1:NP_724538.1 Gene:pk / 45343 FlyBaseID:FBgn0003090 Length:1299 Species:Drosophila melanogaster
Sequence 2:NP_001025269.1 Gene:prickle1b / 556148 ZFINID:ZDB-GENE-030131-2152 Length:872 Species:Danio rerio


Alignment Length:944 Identity:338/944 - (35%)
Similarity:453/944 - (47%) Gaps:209/944 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   487 PSPPSLLHHPAGGTSSASAHAPFLGGPHMD--------MQRQSHSDDDSGCALEEYTWVPPGLRP 543
            |.|.||        .:.|...|....|.||        .||.|.||||||||||||||||||||.
Zfish     7 PHPMSL--------ETTSGIWPITRAPDMDSRGAKAFGFQRSSTSDDDSGCALEEYTWVPPGLRA 63

  Fly   544 DQVRLYFSQIPDDKVPYVNSPGEQYRVRQLLHQLPPHDNEVRYCHSLTDEERKELRLFSTQRKRD 608
            :||::|||.:|::||||||||||::|:||||:||||||||:|||.||:||||:||.:||.|||::
Zfish    64 EQVQIYFSCLPEEKVPYVNSPGEKHRIRQLLYQLPPHDNEIRYCQSLSDEERRELHMFSMQRKKE 128

  Fly   609 ALGRGNVRQLMSA--RPCDGCDDLISTGDIAVFATRLGPNASWHPACFACSVCRELLVDLIYFHR 671
            |||||..:.|..|  ..|:.|.:.|:.|::||||:|.||...||||||.|..|.|||||||||:.
Zfish   129 ALGRGTPKLLPRALQHNCEHCKENINGGEMAVFASRAGPGPCWHPACFTCYTCHELLVDLIYFYH 193

  Fly   672 DGRMYCGRHHAETLKPRCSACDEIILADECTEAEGRAWHMNHFACHECDKQLGGQRYIMREGKPY 736
            :|.::|||||||.||||||||||||.||||||||||.|||.||:|.||:..||||||||::|:|:
Zfish   194 NGNIHCGRHHAELLKPRCSACDEIIFADECTEAEGRHWHMKHFSCFECETILGGQRYIMKDGRPF 258

  Fly   737 CLHCFDAMFAEYCDYCGEAIGVDQGQMSHDGQHWHATDECFSCNTCRCSLLGRAFLPRRGAIYCS 801
            |..||::::||||:.|||.||||..||:::|.||||||:||.|..|:.||||..|||:.|.||||
Zfish   259 CCGCFESLYAEYCEACGENIGVDHAQMTYEGVHWHATDKCFCCAQCKTSLLGCPFLPKDGRIYCS 323

  Fly   802 IACSKGEPPTPSDSSGTGMYTTPTPPTQR-VRPHPQAPLPARIPSSHASSSPPMSPQQQQQHQAT 865
            ..||.||....||||.:...:..:..::| :|             ...||.|....||.:.:.||
Zfish   324 KDCSLGEDVQASDSSDSAFQSARSRESRRSIR-------------MGKSSRPTEQCQQTKLYSAT 375

  Fly   866 -----------------------FNQAMYQMQSQQMEAAGGLVD---QSKSYA------------ 892
                                   |.:..|..:..:.||....|:   :.:.|.            
Zfish   376 DYRTSSLCGDNTETMCHQLERINFTEDNYWRERDEQEAPEDSVEDWAEHEDYMTQLLLKFGDRGV 440

  Fly   893 --ASDSDAG---VVKDLEHGG-----HMGGGDL------TDFSGGRASSTSQNLSPLNSPGDFQP 941
              |.||.|.   :|||.|...     .|.|.:|      ||....::.....:.:..:.||   |
Zfish   441 IHAEDSRAAEPWMVKDTETNRTKPEIKMSGHNLASKKHHTDMYWAQSQDGLGDSAYGSHPG---P 502

  Fly   942 HFLPKPMELQRDGVYNFNEMSSNLDAAWSAKPTNSYH-----LQRQLLENPHTA--SMPELAGKL 999
            ....|..||:.|        ...:...|| :|...|.     :..:|.:..|..  ||..||   
Zfish   503 ASARKIQELEMD--------QGTVPGFWS-EPRQWYEDSLECITSELRKADHNIGDSMDSLA--- 555

  Fly  1000 VAPPAHMQHLSQLHAVS---SHQFQQHEYADILHPPPPPPGEIPELPTPNLSVASTALPPELMGS 1061
                     ||.:...|   ..:.:|..|:  |........||.|  ..|:|...|     |..|
Zfish   556 ---------LSNITGASVDGDSKDRQTIYS--LQNMKDQEREIEE--CDNISNVGT-----LNSS 602

  Fly  1062 PTHSAGD--RSLNTPMSTQSA-----------SHAPPHPVSILSGASSSSPMS----------GE 1103
            ..|.:.:  ||||:.:..:..           ...||:     .||...||::          .:
Zfish   603 MLHRSANSLRSLNSELGHEETLGQGAREDDEEDRIPPY-----FGAEPPSPLNLPVLRRTKSQSQ 662

  Fly  1104 P-AKKKGVRFEGIPDTLPRSRSYSGNGAGTSGGGERERDRD----------KDKEGGGRHGHGHS 1157
            | ::.:.|:|.   |.:.....|...|.......||.|.|.          .::....||.|   
Zfish   663 PQSRSQQVKFS---DDVLEKGYYGALGLRQPPMSERTRRRTFHIEEEAAAAAERRPANRHHH--- 721

  Fly  1158 SRRRRRRKSSSSSSHHRSGSGHRSHSTTRADTYAPAQPLSSSYQGPPSVLQAANLVH-ESPSRQQ 1221
             :||..||:.|.::.|..       |..|...:...|.:||:...|.:.:...:..| :.|.||.
Zfish   722 -KRRHSRKTRSENALHLP-------SKNRGKLHVVPQVISSNMPEPRNGILLNHSAHSQHPYRQT 778

  Fly  1222 ----------REREREREREESEESDVCSTCSSSSSSSED--YMMMYQLPQRR----HY----GG 1266
                      |..:.:...::.||.|.|||||||||.||:  :.:...:|:.|    ||    ..
Zfish   779 TSDFPQQGMVRLDQFQDFCDDDEEDDWCSTCSSSSSESEEEGFFLGQPIPKPRSQSFHYYTEDYP 843

  Fly  1267 VRV-SYVPNDALAYDRKRKPSELGGDKDKNCIIS 1299
            .|| :..|........|:|     |.|.||||||
Zfish   844 TRVTALTPPFGSRTKLKKK-----GHKGKNCIIS 872

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pkNP_724538.1 PET_Prickle 523..618 CDD:193602 70/94 (74%)
LIM1_Prickle 624..682 CDD:188799 33/57 (58%)
LIM2_Prickle 687..742 CDD:188802 40/54 (74%)
LIM3_Prickle 747..805 CDD:188804 35/57 (61%)
prickle1bNP_001025269.1 PET_Prickle 43..139 CDD:193602 70/95 (74%)
LIM1_Prickle 146..204 CDD:188799 33/57 (58%)
LIM2_Prickle 209..264 CDD:188802 40/54 (74%)
LIM3_Prickle 269..327 CDD:188804 35/57 (61%)

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