DRSC/TRiP Functional Genomics Resources

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Protein Alignment net and Olig1

DIOPT Version :10

Sequence 1:NP_524820.2 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_068538.2 Gene:Olig1 / 60394 RGDID:621129 Length:261 Species:Rattus norvegicus


Alignment Length:128 Identity:33/128 - (25%)
Similarity:61/128 - (47%) Gaps:25/128 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 LIG-KQPSAKKTLKERTQKESTSSSFLEASLSDEDLNKTGLAPISRPH---------QHQRNYKN 264
            |:| :||....:        |::||...|||..:...:...||::.|.         :.....:.
  Rat    35 LVGYRQPPISSS--------SSTSSSSTASLLPKPAREKPEAPLAEPRGPAPESGGARADAKEEQ 91

  Fly   265 MTRERRIEANARERTRVHTISAAYETLRQAVPAYAST-------QKLSKLSVLRVACSYILTL 320
            ..::.|.:.|:|||.|:..::.|.:.||:.:..|::.       :||||::.|.:|.:|||.|
  Rat    92 QQQQLRRKINSRERKRMQDLNLAMDALREVILPYSAAHCQGAPGRKLSKIATLLLARNYILLL 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_524820.2 bHLH_TS_ATOH8 262..329 CDD:381427 20/66 (30%)
Olig1NP_068538.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 41..105 13/71 (18%)
bHLH_TS_OLIG1 96..165 CDD:381512 20/59 (34%)

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