DRSC/TRiP Functional Genomics Resources

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Protein Alignment net and Hand1

DIOPT Version :9

Sequence 1:NP_001259789.1 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_067603.1 Gene:Hand1 / 59112 RGDID:621206 Length:216 Species:Rattus norvegicus


Alignment Length:115 Identity:33/115 - (28%)
Similarity:56/115 - (48%) Gaps:14/115 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 PISRPHQHQRNYKNM---TRERRIEANARERTRVHTISAAYETLRQAVPAYASTQKLSKLSVLRV 312
            |.:||.|.....:.:   ...|:.....:||.|..:|::|:..||:.:|...:..||||:..||:
  Rat    74 PDARPSQSPGRLEALGGRLPRRKGSGPKKERRRTESINSAFAELRECIPNVPADTKLSKIKTLRL 138

  Fly   313 ACSYILTLSRMAGEDYSADQSVPSIATCLEAVTSTI-QTEG--KVKRKKD 359
            |.|||..|..:..:|..|...        ||..:.: :|:|  :.|||::
  Rat   139 ATSYIAYLMDVLAKDAQAGDP--------EAFKAELKKTDGGRESKRKRE 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_001259789.1 HLH 269..320 CDD:278439 19/50 (38%)
Hand1NP_067603.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..109 8/34 (24%)
HLH 103..152 CDD:197674 19/48 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 165..203 5/16 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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