DRSC/TRiP Functional Genomics Resources

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Protein Alignment net and olig3

DIOPT Version :10

Sequence 1:NP_524820.2 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001103863.1 Gene:olig3 / 566728 ZFINID:ZDB-GENE-080903-1 Length:255 Species:Danio rerio


Alignment Length:120 Identity:39/120 - (32%)
Similarity:61/120 - (50%) Gaps:24/120 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 STSSSFLEASLSDEDLNKTGLAPISRPHQHQRNYKNMTRER-----RIEANARERTRVHTISAAY 288
            ||.:..|: .::.|.|:||       |...:...|....|:     |::.|.|||.|:|.::.|.
Zfish    38 STQNELLQ-KMASEHLSKT-------PSGSKYKLKKQVTEQEIQQLRLKINGRERKRMHDLNLAM 94

  Fly   289 ETLRQAVPAYA---STQKLSKLSVLRVACSYILTLS-------RMAGEDYSADQS 333
            :.||:.:| ||   |.:||||::.|.:|.:|||.|:       |:.||.|....|
Zfish    95 DGLREVMP-YAHGPSVRKLSKIATLLLARNYILMLTSSLDEMKRLVGEIYGGHHS 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_524820.2 bHLH_TS_ATOH8 262..329 CDD:381427 29/81 (36%)
olig3NP_001103863.1 bHLH_TS_OLIG3 60..140 CDD:381511 27/80 (34%)

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