DRSC/TRiP Functional Genomics Resources

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Protein Alignment net and figla

DIOPT Version :10

Sequence 1:NP_524820.2 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001016342.1 Gene:figla / 549096 XenbaseID:XB-GENE-966403 Length:203 Species:Xenopus tropicalis


Alignment Length:162 Identity:41/162 - (25%)
Similarity:72/162 - (44%) Gaps:21/162 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 KIEAFSALLIGKQPSAKKTLKERTQKESTSSSFLEASLSDEDLNKTGLAPISRPHQHQRNYKNMT 266
            ||| :.:|.:...|   :.|.|..::..|...::.:      :||....| |..:....|::.:.
 Frog     4 KIE-YPSLCVTPPP---ELLGEVLREHYTPLPYMAS------INKMKRLP-SGHYFCMENFEEVL 57

  Fly   267 RERRIEANARERTRVHTISAAYETLRQAVPAYASTQKLSKLSVLRVACSYILTLSRMAGE--DYS 329
             |||..|||:||.|:..|::.:..|:..||.....:|.||:..|:.|..||..|..:..|  .:.
 Frog    58 -ERRQAANAKERERIRNINSGFSKLKTIVPLIPKDRKPSKVDTLKAATEYIRLLHDILEETGGFE 121

  Fly   330 ADQSVPSI-------ATCLEAVTSTIQTEGKV 354
            ..:.:|.|       .|.:.....||.|:.::
 Frog   122 KVEDLPDIELTDRYAGTLIPEFRGTIPTDFRI 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_524820.2 bHLH_TS_ATOH8 262..329 CDD:381427 22/68 (32%)
figlaNP_001016342.1 bHLH_TS_FIGLA 60..115 CDD:381428 19/54 (35%)

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