DRSC/TRiP Functional Genomics Resources

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Protein Alignment net and olig3

DIOPT Version :10

Sequence 1:NP_524820.2 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001008191.1 Gene:olig3 / 493553 XenbaseID:XB-GENE-919789 Length:263 Species:Xenopus tropicalis


Alignment Length:122 Identity:41/122 - (33%)
Similarity:63/122 - (51%) Gaps:23/122 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 STSSSFLEASLSDEDLNKTGLAPISRPHQHQRNYK-------NMTRERRIEANARERTRVHTISA 286
            ||.:..|: .:|:|.|:|.|    ||.......||       ...::.|::.|.|||.|:|.::.
 Frog    37 STQNDMLQ-KMSEEMLSKHG----SRGEGESSKYKIKKQLSEQDLQQLRLKINGRERKRMHDLNL 96

  Fly   287 AYETLRQAVPAYA---STQKLSKLSVLRVACSYILTLS-------RMAGEDYSADQS 333
            |.:.||:.:| ||   |.:||||::.|.:|.:|||.|:       |:.||.|....|
 Frog    97 AMDGLREVMP-YAHGPSVRKLSKIATLLLARNYILMLTSSLEEMKRLVGEIYGGHHS 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_524820.2 bHLH_TS_ATOH8 262..329 CDD:381427 29/83 (35%)
olig3NP_001008191.1 bHLH_SF 64..144 CDD:469605 27/80 (34%)

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