DRSC/TRiP Functional Genomics Resources

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Protein Alignment net and cato

DIOPT Version :10

Sequence 1:NP_524820.2 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster


Alignment Length:172 Identity:52/172 - (30%)
Similarity:77/172 - (44%) Gaps:41/172 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 QLEPL--------ALVTTKKQCVDQA-------GPKIEAFSALLIGKQPSAKKTLKERTQKESTS 231
            ||.|:        |.::.:.|.:|.|       ||.:||...   ..||..|:          .|
  Fly    27 QLPPVSGQDYGQGAFLSPEWQFLDAAGGTQTELGPIMEAQGQ---HTQPQTKR----------RS 78

  Fly   232 SSFLEASLSDEDLNKTGLAPISRPHQHQRNYKNMTRERRIEANARERTRVHTISAAYETLRQAVP 296
            :||..:........:|.|:|            .:.:.||..||||||.|::.::||:|.||:.||
  Fly    79 NSFTGSDGRKSSPEQTNLSP------------TVQKRRRQAANARERKRMNGLNAAFERLREVVP 131

  Fly   297 AYASTQKLSKLSVLRVACSYILTLSRMAGE-DYSADQSVPSI 337
            |.:..|||||...|::|.||||.|..:... |...|.:..:|
  Fly   132 APSIDQKLSKFETLQMAQSYILALCDLLNNGDVEVDAAAYTI 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_524820.2 bHLH_TS_ATOH8 262..329 CDD:381427 30/67 (45%)
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 29/54 (54%)

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