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Protein Alignment net and twist1a
DIOPT Version :9
Sequence 1: | NP_001259789.1 |
Gene: | net / 45339 |
FlyBaseID: | FBgn0002931 |
Length: | 360 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_571059.1 |
Gene: | twist1a / 30175 |
ZFINID: | ZDB-GENE-000210-6 |
Length: | 171 |
Species: | Danio rerio |
Alignment Length: | 159 |
Identity: | 40/159 - (25%) |
Similarity: | 73/159 - (45%) |
Gaps: | 42/159 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 177 AAHPEQLEPLALVTTKKQCVDQAGPKIEAFSALLIGKQPSAKKTLKE--------RTQKESTSSS 233
::.|| .|:..:...::.:|:..|| .:..|:.:::|..:: |::|.|.|||
Zfish 11 SSSPE--SPVDSLGNSEEELDRRQPK------RVSRKKRASRKNAEDSDSPTPGKRSKKCSNSSS 67
Fly 234 FLEASLSDEDLNKTGLAPISRPHQHQRNYKNMTRERRIEANARERTRVHTISAAYETLRQAVPAY 298
:..|.||| :.:|:.||.|||.|..:::.|:.:||:.:|..
Zfish 68 ---SPQSLEDL----------------------QTQRVMANVRERQRTQSLNEAFASLRKIIPTL 107
Fly 299 ASTQKLSKLSVLRVACSYILTLSRMAGED 327
.| .||||:..|::|..||..|.::...|
Zfish 108 PS-DKLSKIQTLKLAARYIDFLCQVLQSD 135
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
net | NP_001259789.1 |
HLH |
269..320 |
CDD:278439 |
20/50 (40%) |
twist1a | NP_571059.1 |
HLH |
78..128 |
CDD:278439 |
20/50 (40%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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