DRSC/TRiP Functional Genomics Resources

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Protein Alignment net and Neurod1

DIOPT Version :10

Sequence 1:NP_524820.2 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_035024.1 Gene:Neurod1 / 18012 MGIID:1339708 Length:357 Species:Mus musculus


Alignment Length:176 Identity:53/176 - (30%)
Similarity:83/176 - (47%) Gaps:35/176 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 DQAGPKIEAFSALLIGKQPSAKKTLKERTQKESTSSSFLEASLSDEDLNKTGLAPISRPHQHQRN 261
            |:...::||.:|    ::.|.:...:|..:.|.     ||....:|:..:.     .:|.:....
Mouse    37 DKKEDELEAMNA----EEDSLRNGGEEEEEDED-----LEEEEEEEEEEED-----QKPKRRGPK 87

  Fly   262 YKNMTRE-------RRIEANARERTRVHTISAAYETLRQAVPAYASTQKLSKLSVLRVACSYILT 319
            .|.||:.       ||::||||||.|:|.::||.:.||:.||.|:.||||||:..||:|.:||..
Mouse    88 KKKMTKARLERFKLRRMKANARERNRMHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWA 152

  Fly   320 LSRMAGEDYSAD-----------QSVPS---IATCLEAVTSTIQTE 351
            ||.:.....|.|           .|.|:   :|.||:....|...|
Mouse   153 LSEILRSGKSPDLVSFVQTLCKGLSQPTTNLVAGCLQLNPRTFLPE 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_524820.2 bHLH_TS_ATOH8 262..329 CDD:381427 33/73 (45%)
Neurod1NP_035024.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..94 14/70 (20%)
bHLH_TS_NeuroD1 75..160 CDD:381562 34/89 (38%)
Nuclear localization signal. /evidence=ECO:0000255 87..93 2/5 (40%)
Neuro_bHLH 160..284 CDD:463621 9/39 (23%)

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