DRSC/TRiP Functional Genomics Resources

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Protein Alignment net and tcf23

DIOPT Version :9

Sequence 1:NP_001259789.1 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:XP_001342593.4 Gene:tcf23 / 100002924 ZFINID:ZDB-GENE-090806-5 Length:277 Species:Danio rerio


Alignment Length:219 Identity:58/219 - (26%)
Similarity:86/219 - (39%) Gaps:51/219 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 LRLQHEIMPNPAHIYVRHPGVTTLHRSLAAHPEQLEPLALVTTKKQCVDQAGPKIEA-------- 205
            |:||...:..|...:..|..:.:|....:.||.:.||......|...:    |..||        
Zfish    30 LQLQDGSLHFPRPFWGLHAHLPSLCSLGSEHPWEAEPEITQRLKIHTL----PHREAEGGDEETH 90

  Fly   206 --FSALLIGKQPS---AKKTLKE--------------RTQKESTSSSFLEASLSDEDLNKTGLAP 251
              |..|....||:   |::.|.|              |||..:.:...|......:...|:|...
Zfish    91 GLFCHLERRVQPAVPMAERALDEDMAWQRGEDGGKSLRTQTWNQTCVKLATQREAKKWVKSGPTA 155

  Fly   252 ISRPHQHQRNYKNMTRERRIEANARERTRVHTISAAYETLRQAVPAYASTQKLSKLSVLRVACSY 316
            .||..:.|.:.:|.         ||||:||..:..|:.:|:.|:|:.....|||||.||.:|.:|
Zfish   156 SSRACKSQTSPENA---------ARERSRVRNLRQAFHSLQAALPSVPPDTKLSKLDVLVLATNY 211

  Fly   317 ILTLSR------MAGEDYSADQSV 334
            |..|:.      |.|     ||||
Zfish   212 IAHLTETLDQGGMLG-----DQSV 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_001259789.1 HLH 269..320 CDD:278439 20/50 (40%)
tcf23XP_001342593.4 HLH 170..221 CDD:197674 21/50 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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