DRSC/TRiP Functional Genomics Resources

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Protein Alignment VhaPPA1-1 and atpE

DIOPT Version :10

Sequence 1:NP_652010.1 Gene:VhaPPA1-1 / 45247 FlyBaseID:FBgn0028662 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_418193.1 Gene:atpE / 948253 ECOCYCID:EG10102 Length:79 Species:Escherichia coli


Alignment Length:63 Identity:19/63 - (30%)
Similarity:32/63 - (50%) Gaps:9/63 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 YMWACLGIGLSVSLSVVGAALGIHTTGTSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAI 111
            ||.|.:.:|    |:.:|||:||...|...:.|..:.|     :||.::..:...:.||:.||
E. coli    10 YMAAAVMMG----LAAIGAAIGIGILGGKFLEGAARQP-----DLIPLLRTQFFIVMGLVDAI 63

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaPPA1-1NP_652010.1 ATP-synt_Vo_c_ATP6F_rpt1 51..113 CDD:349417 17/61 (28%)
ATP-synt_Vo_c_ATP6F_rpt2 138..202 CDD:349418
atpENP_418193.1 PRK06876 2..79 CDD:180739 19/63 (30%)
Blue background indicates that the domain is not in the aligned region.

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