DRSC/TRiP Functional Genomics Resources

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Protein Alignment VhaPPA1-1 and VMA11

DIOPT Version :10

Sequence 1:NP_652010.1 Gene:VhaPPA1-1 / 45247 FlyBaseID:FBgn0028662 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_015090.1 Gene:VMA11 / 855842 SGDID:S000006155 Length:164 Species:Saccharomyces cerevisiae


Alignment Length:170 Identity:51/170 - (30%)
Similarity:85/170 - (50%) Gaps:23/170 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 SSNPY------MWACLGIGLSVSLSVVGAALGIHTTGTSIVGGGVKAPRIKTKNLISVIFCEAVA 103
            :||.|      .:...|...::.||.:|||:|...:|..|.|.|...|.:..|:||.|:....:|
Yeast     6 ASNIYAPLYAPFFGFAGCAAAMVLSCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILA 70

  Fly   104 IYGLITAIVLSGQL---EQFSMETALSQAAIQNTNWFSGYLIFGAGLAVGLVNLFCGIAVGIVGS 165
            ||||:.|::::|.|   |.:::              |:|::....||.||...|..|.|:|:||.
Yeast    71 IYGLVVAVLIAGNLSPTEDYTL--------------FNGFMHLSCGLCVGFACLSSGYAIGMVGD 121

  Fly   166 GAALSDAANAALFVKILIVEIFGSAIGLFGLIVGIYMTSK 205
            ...........|||.|:::.||...:||:|:||.:.:.::
Yeast   122 VGVRKYMHQPRLFVGIVLILIFSEVLGLYGMIVALILNTR 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaPPA1-1NP_652010.1 ATP-synt_Vo_c_ATP6F_rpt1 51..113 CDD:349417 22/61 (36%)
ATP-synt_Vo_c_ATP6F_rpt2 138..202 CDD:349418 22/63 (35%)
VMA11NP_015090.1 PRK13469 17..124 CDD:469780 37/120 (31%)
ATP-synt_Vo_c_ATP6C_rpt2 92..159 CDD:349416 23/80 (29%)

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